RNA–Protein interactions for RNA: YDR462W

MRPL28, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL28, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL28	YDR462W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.73	□□□□□ -1.17	not detected
MRPL28	YDR462W	SPC110	P32380	944 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	MFT1	P33441	392 aa	Known RBP	7.73	□□□□□ -1.17
MRPL28	YDR462W	RER2	P35196	286 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	GEF1	P37020	779 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	EPL1	P43572	832 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	PPM2	Q08282	695 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	MSB4	Q12317	492 aa		7.73	□□□□□ -1.17
MRPL28	YDR462W	HSP82	P02829	709 aa	Known RBP	7.72	□□□□□ -1.17
MRPL28	YDR462W	MCM4	P30665	933 aa	Known RBP	7.72	□□□□□ -1.17
MRPL28	YDR462W	LTV1	P34078	463 aa		7.72	□□□□□ -1.17
MRPL28	YDR462W	IOC3	P43596	787 aa		7.72	□□□□□ -1.17
MRPL28	YDR462W	IRC8	P47046	822 aa		7.72	□□□□□ -1.17
MRPL28	YDR462W	CTH1	P47976	325 aa		7.72	□□□□□ -1.17
MRPL28	YDR462W	VMS1	Q04311	632 aa	Known RBP	7.72	□□□□□ -1.17
MRPL28	YDR462W	GRE2	Q12068	342 aa	Known RBP	7.72	□□□□□ -1.17
MRPL28	YDR462W	SFI1	Q12369	946 aa		7.72	□□□□□ -1.17
MRPL28	YDR462W	HXK1	P04806	485 aa	Known RBP	7.71	□□□□□ -1.18
MRPL28	YDR462W	RPL17A	P05740	184 aa	Known RBP	7.71	□□□□□ -1.18
MRPL28	YDR462W	PET111	P08468	800 aa		7.71	□□□□□ -1.18
MRPL28	YDR462W	MRPL32	P25348	183 aa		7.71	□□□□□ -1.18
MRPL28	YDR462W	BMH2	P34730	273 aa	Known RBP	7.71	□□□□□ -1.18
MRPL28	YDR462W	NUG1	P40010	520 aa	Known RBP	7.71	□□□□□ -1.18
MRPL28	YDR462W	RPL17B	P46990	184 aa	Known RBP	7.71	□□□□□ -1.18
MRPL28	YDR462W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
MRPL28	YDR462W	LAM6	Q08001	693 aa		7.71	□□□□□ -1.18
MRPL28	YDR462W	DCS2	Q12123	353 aa		7.71	□□□□□ -1.18
MRPL28	YDR462W	CYB2	P00175	591 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	COQ1	P18900	473 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	ASF1	P32447	279 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	PSY4	P38193	441 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	RPN10	P38886	268 aa	Known RBP	7.7	□□□□□ -1.18
MRPL28	YDR462W	NOC2	P39744	710 aa	Known RBP	7.7	□□□□□ -1.18
MRPL28	YDR462W	CUE3	P53137	624 aa	Known RBP	7.7	□□□□□ -1.18
MRPL28	YDR462W	COG4	Q06096	861 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	FIG2	P25653	1609 aa		7.7	□□□□□ -1.18
MRPL28	YDR462W	RGP1	P16664	663 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	MCM3	P24279	971 aa	Known RBP	7.69	□□□□□ -1.18
MRPL28	YDR462W	SWI4	P25302	1093 aa	Known RBP	7.69	□□□□□ -1.18
MRPL28	YDR462W	NGR1	P32831	672 aa	Known RBP	7.69	□□□□□ -1.18
MRPL28	YDR462W	GRX7	P38068	203 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	AKR1	P39010	764 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	CIN4	P39110	191 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	VPS75	P53853	264 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	RAT1	Q02792	1006 aa	Known RBP	7.69	□□□□□ -1.18
MRPL28	YDR462W	VPS60	Q03390	229 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	SRC1	Q03707	834 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	TFC8	Q12308	588 aa		7.69	□□□□□ -1.18
MRPL28	YDR462W	URA1	P28272	314 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPL28	YDR462W	PRP40	P33203	583 aa	Known RBP	7.68	□□□□□ -1.18
MRPL28	YDR462W	PXL1	P36166	706 aa		7.68	□□□□□ -1.18
MRPL28	YDR462W	STR2	P47164	639 aa		7.68	□□□□□ -1.18
MRPL28	YDR462W	YCG1	Q06680	1035 aa		7.68	□□□□□ -1.18
MRPL28	YDR462W	THI3	Q07471	609 aa		7.68	□□□□□ -1.18
MRPL28	YDR462W	GET3	Q12154	354 aa	Known RBP	7.68	□□□□□ -1.18
MRPL28	YDR462W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
MRPL28	YDR462W	CDC6	P09119	513 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	PHO13	P19881	312 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	HCA4	P20448	770 aa	Known RBP	7.67	□□□□□ -1.18
MRPL28	YDR462W	MRC1	P25588	1096 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	BMH1	P29311	267 aa	Known RBP	7.67	□□□□□ -1.18
MRPL28	YDR462W	MGM1	P32266	881 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	RRP8	P38961	392 aa	Known RBP	7.67	□□□□□ -1.18
MRPL28	YDR462W	UFD2	P54860	961 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	RPS15	Q01855	142 aa	Known RBP	7.67	□□□□□ -1.18
MRPL28	YDR462W	TFC6	Q06339	672 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	DIB1	Q06819	143 aa	Predicted RBP	7.67	□□□□□ -1.18
MRPL28	YDR462W	TMA16	Q08687	178 aa		7.67	□□□□□ -1.18
MRPL28	YDR462W	CHO2	P05374	869 aa	Known RBP	7.66	□□□□□ -1.18
MRPL28	YDR462W	STE11	P23561	717 aa		7.66	□□□□□ -1.18
MRPL28	YDR462W	ADE17	P38009	592 aa	Known RBP	7.66	□□□□□ -1.18
MRPL28	YDR462W	INM2	Q05533	292 aa		7.66	□□□□□ -1.18
MRPL28	YDR462W	CTI6	Q08923	506 aa		7.66	□□□□□ -1.18
MRPL28	YDR462W	DPH6	Q12429	685 aa		7.66	□□□□□ -1.18
MRPL28	YDR462W	VPS1	P21576	704 aa	Known RBP	7.65	□□□□□ -1.18
MRPL28	YDR462W	MYO3	P36006	1272 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	ICP55	P40051	511 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	ALD2	P47771	506 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	HDA1	P53973	706 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	GDE1	Q02979	1223 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	GFD1	Q04839	188 aa	Known RBP	7.65	□□□□□ -1.18
MRPL28	YDR462W	HCR1	Q05775	265 aa	Known RBP	7.65	□□□□□ -1.18
MRPL28	YDR462W	APL4	Q12028	832 aa		7.65	□□□□□ -1.18
MRPL28	YDR462W	SSA2	P10592	639 aa	Known RBP	7.64	□□□□□ -1.19
MRPL28	YDR462W	CDC15	P27636	974 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	ANP1	P32629	500 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	PCH2	P38126	564 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	MAL31	P38156	614 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	RXT2	P38255	430 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	YIR042C	P40586	236 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	PTK2	P47116	818 aa	Known RBP	7.64	□□□□□ -1.19
MRPL28	YDR462W	ALF1	P53904	254 aa		7.64	□□□□□ -1.19
MRPL28	YDR462W	SYF1	Q04048	859 aa	Predicted RBP	7.64	□□□□□ -1.19
MRPL28	YDR462W	PDC1	P06169	563 aa	Known RBP	7.63	□□□□□ -1.19
MRPL28	YDR462W	SAP190	P36123	1033 aa		7.63	□□□□□ -1.19
MRPL28	YDR462W	BOI1	P38041	980 aa	Known RBP	7.63	□□□□□ -1.19
MRPL28	YDR462W	ALG2	P43636	503 aa		7.63	□□□□□ -1.19
MRPL28	YDR462W	MMR1	Q06324	491 aa		7.63	□□□□□ -1.19
MRPL28	YDR462W	CEX1	Q12453	761 aa		7.63	□□□□□ -1.19
MRPL28	YDR462W	PTC5	Q12511	572 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms