RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C LEM3P42838 414 aa5.23□□□□□ -1.57
CDC40YDR364C GUP1P53154 560 aa5.23□□□□□ -1.57
CDC40YDR364C YBR197CP38306 217 aa5.22□□□□□ -1.57
CDC40YDR364C PPT1P53043 513 aa5.22□□□□□ -1.57
CDC40YDR364C PAN5P38787 379 aa5.21□□□□□ -1.58
CDC40YDR364C INP51P40559 946 aaKnown RBP5.21□□□□□ -1.58
CDC40YDR364C YJL181WP46987 611 aa5.21□□□□□ -1.58
CDC40YDR364C XRN1P22147 1528 aaKnown RBP5.2□□□□□ -1.58
CDC40YDR364C BIO5P53744 561 aaKnown RBP5.2□□□□□ -1.58
CDC40YDR364C SOG2Q08817 791 aa5.2□□□□□ -1.58
CDC40YDR364C NCE103P53615 221 aa5.19□□□□□ -1.58
CDC40YDR364C POL5P39985 1022 aaKnown RBP5.18□□□□□ -1.58
CDC40YDR364C MSN1P22148 382 aa5.17□□□□□ -1.58
CDC40YDR364C RNQ1P25367 405 aa5.17□□□□□ -1.58
CDC40YDR364C MAE1P36013 669 aaKnown RBP5.17□□□□□ -1.58
CDC40YDR364C TGL4P36165 910 aa5.17□□□□□ -1.58
CDC40YDR364C FOX2Q02207 900 aaKnown RBP5.17□□□□□ -1.58
CDC40YDR364C YBR287WP38355 427 aa5.16□□□□□ -1.58
CDC40YDR364C EMG1Q06287 252 aaKnown RBP5.16□□□□□ -1.58
CDC40YDR364C ECM23Q02710 187 aa5.16□□□□□ -1.58
CDC40YDR364C TFA2P36145 328 aa5.15□□□□□ -1.59
CDC40YDR364C SEA4P38164 1038 aa5.15□□□□□ -1.59
CDC40YDR364C NIT1P40447 199 aa5.15□□□□□ -1.59
CDC40YDR364C ALD3P54114 506 aa5.15□□□□□ -1.59
CDC40YDR364C SPO71Q03868 1245 aa5.15□□□□□ -1.59
CDC40YDR364C ISC10P32645 267 aa5.14□□□□□ -1.59
CDC40YDR364C SEG2P34250 1132 aa5.14□□□□□ -1.59
CDC40YDR364C LRG1P35688 1017 aa5.14□□□□□ -1.59
CDC40YDR364C TTI1P36097 1038 aa5.14□□□□□ -1.59
CDC40YDR364C GIS1Q03833 894 aa5.14□□□□□ -1.59
CDC40YDR364C REV3P14284 1504 aa5.13□□□□□ -1.59
CDC40YDR364C UBX7P38349 436 aa5.13□□□□□ -1.59
CDC40YDR364C ALD4P46367 519 aaKnown RBP5.13□□□□□ -1.59
CDC40YDR364C ECL1P48235 211 aa5.13□□□□□ -1.59
CDC40YDR364C GIC2Q06648 383 aa5.13□□□□□ -1.59
CDC40YDR364C ELG1Q12050 791 aa5.13□□□□□ -1.59
CDC40YDR364C SDH1Q00711 640 aa5.12□□□□□ -1.59
CDC40YDR364C BUD4P47136 1447 aa5.11□□□□□ -1.59
CDC40YDR364C FUS1P11710 512 aa5.11□□□□□ -1.59
CDC40YDR364C AIM46P38885 310 aa5.11□□□□□ -1.59
CDC40YDR364C FIR1P40020 876 aa5.11□□□□□ -1.59
CDC40YDR364C GCD1P09032 578 aaPredicted RBP5.1□□□□□ -1.59
CDC40YDR364C YCR015CP25616 317 aa5.1□□□□□ -1.59
CDC40YDR364C BOI1P38041 980 aaKnown RBP5.1□□□□□ -1.59
CDC40YDR364C PUF6Q04373 656 aaKnown RBP5.1□□□□□ -1.59
CDC40YDR364C POL12P38121 705 aaPredicted RBP5.09□□□□□ -1.59
CDC40YDR364C HXT8P40886 569 aa5.09□□□□□ -1.59
CDC40YDR364C THO2P53552 1597 aaKnown RBP5.08□□□□□ -1.6
CDC40YDR364C ERS1P17261 260 aa5.08□□□□□ -1.6
CDC40YDR364C KIP3P53086 805 aaKnown RBP5.08□□□□□ -1.6
CDC40YDR364C YNR065CP53751 1116 aa5.08□□□□□ -1.6
CDC40YDR364C DFG16Q99234 619 aa5.08□□□□□ -1.6
CDC40YDR364C SIN3P22579 1536 aa5.08□□□□□ -1.6
CDC40YDR364C HVG1P0CE11 249 aa5.07□□□□□ -1.6
CDC40YDR364C RGD2P43556 714 aa5.07□□□□□ -1.6
CDC40YDR364C PUN1Q06991 263 aa5.07□□□□□ -1.6
CDC40YDR364C TAF2P23255 1407 aa5.07□□□□□ -1.6
CDC40YDR364C ECM5Q03214 1411 aa5.07□□□□□ -1.6
CDC40YDR364C SRS2P12954 1174 aa5.06□□□□□ -1.6
CDC40YDR364C NEO1P40527 1151 aa5.06□□□□□ -1.6
CDC40YDR364C YJR124CP47159 448 aa5.06□□□□□ -1.6
CDC40YDR364C FAR11P53917 953 aa5.06□□□□□ -1.6
CDC40YDR364C HAS1Q03532 505 aaKnown RBP5.06□□□□□ -1.6
CDC40YDR364C NTA1P40354 457 aa5.05□□□□□ -1.6
CDC40YDR364C MMM1P41800 426 aa5.04□□□□□ -1.6
CDC40YDR364C SSK2P53599 1579 aa5.04□□□□□ -1.6
CDC40YDR364C GLO4Q12320 285 aa5.04□□□□□ -1.6
CDC40YDR364C YKL222CP35995 705 aa5.04□□□□□ -1.6
CDC40YDR364C CIT3P43635 486 aa5.04□□□□□ -1.6
CDC40YDR364C PRP43P53131 767 aaKnown RBP5.04□□□□□ -1.6
CDC40YDR364C ESC8Q08119 714 aa5.04□□□□□ -1.6
CDC40YDR364C APC11Q12157 165 aa5.04□□□□□ -1.6
CDC40YDR364C MDS3P53094 1487 aa5.03□□□□□ -1.6
CDC40YDR364C PUP1P25043 261 aa5.03□□□□□ -1.6
CDC40YDR364C KTR2P33550 425 aa5.03□□□□□ -1.6
CDC40YDR364C YHL008CP38750 627 aa5.03□□□□□ -1.6
CDC40YDR364C NSI1Q12457 570 aa5.03□□□□□ -1.6
CDC40YDR364C GAS1P22146 559 aaKnown RBP5.02□□□□□ -1.61
CDC40YDR364C CWC15Q03772 175 aaKnown RBP5.02□□□□□ -1.61
CDC40YDR364C YOR059CQ08448 450 aaKnown RBP5.02□□□□□ -1.61
CDC40YDR364C YOR223WQ12015 292 aa5.02□□□□□ -1.61
CDC40YDR364C SKI3P17883 1432 aaKnown RBP5.01□□□□□ -1.61
CDC40YDR364C TSA1P34760 196 aaKnown RBP5.01□□□□□ -1.61
CDC40YDR364C CDA2Q06703 312 aa5.01□□□□□ -1.61
CDC40YDR364C ATG2P53855 1592 aa5□□□□□ -1.61
CDC40YDR364C WHI3P34761 661 aaKnown RBP5□□□□□ -1.61
CDC40YDR364C GPT2P36148 743 aa5□□□□□ -1.61
CDC40YDR364C FET4P40988 552 aa5□□□□□ -1.61
CDC40YDR364C TAF1P46677 1066 aa5□□□□□ -1.61
CDC40YDR364C TIF6Q12522 245 aaKnown RBP5□□□□□ -1.61
CDC40YDR364C HSP78P33416 811 aa4.99□□□□□ -1.61
CDC40YDR364C IRS4P36115 615 aaKnown RBP4.99□□□□□ -1.61
CDC40YDR364C RCM1P53972 490 aa4.99□□□□□ -1.61
CDC40YDR364C CPS1P27614 576 aa4.98□□□□□ -1.61
CDC40YDR364C PYC2P32327 1180 aaKnown RBP4.98□□□□□ -1.61
CDC40YDR364C THI80P35202 319 aa4.98□□□□□ -1.61
CDC40YDR364C RAD55P38953 406 aa4.98□□□□□ -1.61
CDC40YDR364C PSY2P40164 858 aa4.98□□□□□ -1.61
CDC40YDR364C ORC3P54790 616 aa4.98□□□□□ -1.61
CDC40YDR364C YLL054CQ12244 843 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms