RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	RSC4	Q02206	625 aa		3.81	□□□□□ -1.8
TFB1	YDR311W	BSC2	Q05611	235 aa		3.81	□□□□□ -1.8
TFB1	YDR311W	TOP1	P04786	769 aa		3.8	□□□□□ -1.8
TFB1	YDR311W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
TFB1	YDR311W	PRI2	P20457	528 aa		3.8	□□□□□ -1.8
TFB1	YDR311W	FPR3	P38911	411 aa	Known RBP	3.8	□□□□□ -1.8
TFB1	YDR311W	FAA4	P47912	694 aa	Known RBP	3.8	□□□□□ -1.8
TFB1	YDR311W	HUL5	P53119	910 aa		3.8	□□□□□ -1.8
TFB1	YDR311W	GDE1	Q02979	1223 aa		3.8	□□□□□ -1.8
TFB1	YDR311W	DAL4	Q04895	635 aa		3.8	□□□□□ -1.8
TFB1	YDR311W	INP54	Q08227	384 aa	Known RBP	3.8	□□□□□ -1.8
TFB1	YDR311W	SMC1	P32908	1225 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	CIC1	P38779	376 aa	Known RBP	3.79	□□□□□ -1.8
TFB1	YDR311W	RGD2	P43556	714 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	UBP15	P50101	1230 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	YNL165W	P53891	406 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	CUZ1	P53899	274 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	UBX5	Q06682	500 aa		3.79	□□□□□ -1.8
TFB1	YDR311W	UGA4	P32837	571 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	SCD5	P34758	872 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	TOM20	P35180	183 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	SHM1	P37292	490 aa	Predicted RBP	3.78	□□□□□ -1.8
TFB1	YDR311W	YHL008C	P38750	627 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	RAD55	P38953	406 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	LYS5	P50113	272 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	DPH6	Q12429	685 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	YOR131C	Q12486	218 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	Q0182	Q9ZZW1	134 aa		3.78	□□□□□ -1.8
TFB1	YDR311W	RPS31	P05759	152 aa	Known RBP	3.78	□□□□□ -1.81
TFB1	YDR311W	MCM1	P11746	286 aa		3.78	□□□□□ -1.81
TFB1	YDR311W	MSN1	P22148	382 aa		3.78	□□□□□ -1.81
TFB1	YDR311W	PRE9	P23638	258 aa	Known RBP	3.78	□□□□□ -1.81
TFB1	YDR311W	JJJ2	P46997	583 aa		3.78	□□□□□ -1.81
TFB1	YDR311W	RTS3	P53289	263 aa		3.78	□□□□□ -1.81
TFB1	YDR311W	MET6	P05694	767 aa	Known RBP	3.77	□□□□□ -1.81
TFB1	YDR311W	CDC34	P14682	295 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	IRE1	P32361	1115 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	DUT1	P33317	147 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	YKL069W	P36088	180 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	MNN1	P39106	762 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	ALA1	P40825	983 aa	Known RBP	3.77	□□□□□ -1.81
TFB1	YDR311W	MRPS18	P42847	217 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	YGR053C	P53234	283 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	PPM2	Q08282	695 aa		3.77	□□□□□ -1.81
TFB1	YDR311W	TIF6	Q12522	245 aa	Known RBP	3.77	□□□□□ -1.81
TFB1	YDR311W	RAD4	P14736	754 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	PRP40	P33203	583 aa	Known RBP	3.76	□□□□□ -1.81
TFB1	YDR311W	AHP1	P38013	176 aa	Known RBP	3.76	□□□□□ -1.81
TFB1	YDR311W	LDH1	P38139	375 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	NUG1	P40010	520 aa	Known RBP	3.76	□□□□□ -1.81
TFB1	YDR311W	NTA1	P40354	457 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	NUP82	P40368	713 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	JJJ3	P47138	172 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	POB3	Q04636	552 aa	Known RBP	3.76	□□□□□ -1.81
TFB1	YDR311W	DIT1	P21623	536 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	MLF3	P32047	452 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	GRX4	P32642	244 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	TIM23	P32897	222 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	PSY2	P40164	858 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	QDR2	P40474	542 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	YJR142W	P47173	342 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	YCS4	Q06156	1176 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	OPI10	Q08202	246 aa		3.76	□□□□□ -1.81
TFB1	YDR311W	FLP1	P03870	423 aa		3.75	□□□□□ -1.81
TFB1	YDR311W	MCM5	P29496	775 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	RIP-Chip
TFB1	YDR311W	IRS4	P36115	615 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	YHR020W	P38708	688 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	SPF1	P39986	1215 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	PIC2	P40035	300 aa		3.75	□□□□□ -1.81
TFB1	YDR311W	CTR9	P89105	1077 aa		3.75	□□□□□ -1.81
TFB1	YDR311W	YMR265C	Q03508	461 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	TDA5	Q06417	326 aa	Known RBP	3.75	□□□□□ -1.81
TFB1	YDR311W	MCD1	Q12158	566 aa		3.75	□□□□□ -1.81
TFB1	YDR311W	PSH1	Q12161	406 aa		3.75	□□□□□ -1.81
TFB1	YDR311W	COB	P00163	385 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	GCR1	P07261	785 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	PDC6	P26263	563 aa	Known RBP	3.74	□□□□□ -1.81
TFB1	YDR311W	DYS1	P38791	387 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	FIR1	P40020	876 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	TIM54	P47045	478 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	TYW3	P53177	273 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	SYT1	Q06836	1226 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	CEM1	P39525	442 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	ULP1	Q02724	621 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	YPL109C	Q02981	657 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	UTP4	Q06679	776 aa	Known RBP	3.74	□□□□□ -1.81
TFB1	YDR311W	YDR461C-A	Q2V2P7	80 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	YGR161W-C	Q3E744	92 aa		3.74	□□□□□ -1.81
TFB1	YDR311W	SSB1	P11484	613 aa	Known RBP	3.73	□□□□□ -1.81
TFB1	YDR311W	STE5	P32917	917 aa		3.73	□□□□□ -1.81
TFB1	YDR311W	DUR3	P33413	735 aa		3.73	□□□□□ -1.81
TFB1	YDR311W	BSD2	P38356	321 aa		3.73	□□□□□ -1.81
TFB1	YDR311W	SSB2	P40150	613 aa	Known RBP	3.73	□□□□□ -1.81
TFB1	YDR311W	MON1	P53129	644 aa		3.73	□□□□□ -1.81
TFB1	YDR311W	KRE33	P53914	1056 aa	Known RBP	3.73	□□□□□ -1.81
TFB1	YDR311W	LEU1	P07264	779 aa	Known RBP	3.72	□□□□□ -1.81
TFB1	YDR311W	PHO8	P11491	566 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	ADE12	P80210	433 aa	Known RBP	3.72	□□□□□ -1.81
TFB1	YDR311W	NAN1	Q02931	896 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms