RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA2	YDR295C	ALD6	P54115	500 aa	Known RBP	4.63	□□□□□ -1.67
HDA2	YDR295C	YCS4	Q06156	1176 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	PIN2	Q12057	282 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	MRPL16	P38064	232 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	APM2	P38700	605 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	RTS3	P53289	263 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	RMD1	Q03441	430 aa		4.63	□□□□□ -1.67
HDA2	YDR295C	ESF1	Q06344	628 aa	Known RBP	4.63	□□□□□ -1.67
HDA2	YDR295C	MCM5	P29496	775 aa	Known RBP	4.62	□□□□□ -1.67
HDA2	YDR295C	OSH7	P38755	437 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	MON1	P53129	644 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	SUB1	P54000	292 aa	Known RBP	4.62	□□□□□ -1.67
HDA2	YDR295C	VAC8	P39968	578 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	BRE2	P43132	505 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	YPL109C	Q02981	657 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	MSH6	Q03834	1242 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	TY1A-BL	Q12266	440 aa		4.62	□□□□□ -1.67
HDA2	YDR295C	IDI1	P15496	288 aa		4.61	□□□□□ -1.67
HDA2	YDR295C	PIC2	P40035	300 aa		4.61	□□□□□ -1.67
HDA2	YDR295C	NUT1	P53114	1132 aa		4.61	□□□□□ -1.67
HDA2	YDR295C	UBP2	Q01476	1272 aa		4.61	□□□□□ -1.67
HDA2	YDR295C	VPS72	Q03388	795 aa		4.61	□□□□□ -1.67
HDA2	YDR295C	PRE9	P23638	258 aa	Known RBP	4.6	□□□□□ -1.67
HDA2	YDR295C	GLY1	P37303	387 aa	Known RBP	4.6	□□□□□ -1.67
HDA2	YDR295C	MSC7	P38694	644 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	ULP1	Q02724	621 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	PET112	P33893	541 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	YER156C	P40093	338 aa	Known RBP	4.6	□□□□□ -1.67
HDA2	YDR295C	MAD1	P40957	749 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	YJR008W	P47085	338 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	TPO2	P53283	614 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	GIN4	Q12263	1142 aa		4.6	□□□□□ -1.67
HDA2	YDR295C	DUT1	P33317	147 aa		4.59	□□□□□ -1.67
HDA2	YDR295C	YBR287W	P38355	427 aa		4.59	□□□□□ -1.67
HDA2	YDR295C	RIM11	P38615	370 aa		4.59	□□□□□ -1.67
HDA2	YDR295C	SAP155	P43612	1002 aa		4.59	□□□□□ -1.67
HDA2	YDR295C	PPT1	P53043	513 aa		4.59	□□□□□ -1.67
HDA2	YDR295C	NCL1	P38205	684 aa	Known RBP	4.58	□□□□□ -1.68
HDA2	YDR295C	OSW7	P43611	510 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	SSF2	Q12153	453 aa	Predicted RBP	4.58	□□□□□ -1.68
HDA2	YDR295C	CMR1	Q12510	522 aa	Known RBP	4.58	□□□□□ -1.68
HDA2	YDR295C	MRP10	O75012	95 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	CCP1	P00431	361 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	MRPS18	P42847	217 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	YAF9	P53930	226 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	MCD1	Q12158	566 aa		4.58	□□□□□ -1.68
HDA2	YDR295C	MNR2	P35724	969 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	TFA2	P36145	328 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	NNF1	P47149	201 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	SCW11	P53189	542 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	MDG1	P53885	366 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	ADI1	Q03677	179 aa		4.57	□□□□□ -1.68
HDA2	YDR295C	ROG3	P43602	733 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	FAA4	P47912	694 aa	Known RBP	4.56	□□□□□ -1.68
HDA2	YDR295C	CUZ1	P53899	274 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	YLR346C	Q06139	101 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	FPR4	Q06205	392 aa	Predicted RBP	4.56	□□□□□ -1.68
HDA2	YDR295C	HEM13	P11353	328 aa	Known RBP	4.56	□□□□□ -1.68
HDA2	YDR295C	FUS1	P11710	512 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	CLN2	P20438	545 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	DIT1	P21623	536 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	NPR1	P22211	790 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	ECM2	P38241	364 aa	Known RBP	4.56	□□□□□ -1.68
HDA2	YDR295C	YJL181W	P46987	611 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	TY1A-MR1	Q04215	440 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	GLO4	Q12320	285 aa		4.56	□□□□□ -1.68
HDA2	YDR295C	GCR1	P07261	785 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	HVG1	P0CE11	249 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	CDC34	P14682	295 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	KAR2	P16474	682 aa	Known RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	PRP5	P21372	849 aa	Predicted RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	MET22	P32179	357 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	AMN1	P38285	549 aa	Predicted RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	NMD2	P38798	1089 aa	Known RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	RVS167	P39743	482 aa	Known RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	IOC3	P43596	787 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
HDA2	YDR295C	INP51	P40559	946 aa	Known RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	GNP1	P48813	663 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	GCR2	Q01722	534 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	LCB5	Q06147	687 aa	Known RBP	4.55	□□□□□ -1.68
HDA2	YDR295C	YOL098C	Q12496	1037 aa		4.55	□□□□□ -1.68
HDA2	YDR295C	TAT2	P38967	592 aa		4.54	□□□□□ -1.68
HDA2	YDR295C	PRK1	P40494	810 aa		4.54	□□□□□ -1.68
HDA2	YDR295C	TY1A-DR2	Q03964	440 aa	Known RBP	4.54	□□□□□ -1.68
HDA2	YDR295C	PMT7	Q06644	662 aa		4.54	□□□□□ -1.68
HDA2	YDR295C	BUD21	Q08492	214 aa	Predicted RBP	4.54	□□□□□ -1.68
HDA2	YDR295C	XKS1	P42826	600 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	BIO5	P53744	561 aa	Known RBP	4.53	□□□□□ -1.68
HDA2	YDR295C	KRE33	P53914	1056 aa	Known RBP	4.53	□□□□□ -1.68
HDA2	YDR295C	GDE1	Q02979	1223 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	HEH2	Q03281	663 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	YMR265C	Q03508	461 aa	Known RBP	4.53	□□□□□ -1.68
HDA2	YDR295C	UBX5	Q06682	500 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	YGR053C	P53234	283 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	CWC24	P53769	259 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	NOG1	Q02892	647 aa	Known RBP	4.53	□□□□□ -1.68
HDA2	YDR295C	YDR444W	Q04093	687 aa		4.53	□□□□□ -1.68
HDA2	YDR295C	YKL069W	P36088	180 aa		4.52	□□□□□ -1.69
HDA2	YDR295C	PEX28	P38848	579 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms