RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C RRT6P53117 311 aaPredicted RBP6.89□□□□□ -1.31
MDH3YDL078C YOL036WQ08206 761 aa6.89□□□□□ -1.31
MDH3YDL078C GAL2P13181 574 aa6.88□□□□□ -1.31
MDH3YDL078C RPT3P33298 428 aaKnown RBP6.88□□□□□ -1.31
MDH3YDL078C BSD2P38356 321 aa6.88□□□□□ -1.31
MDH3YDL078C HAL5P38970 855 aaKnown RBP6.88□□□□□ -1.31
MDH3YDL078C NIT1P40447 199 aa6.88□□□□□ -1.31
MDH3YDL078C POL32P47110 350 aa6.88□□□□□ -1.31
MDH3YDL078C YNL193WP53870 558 aa6.88□□□□□ -1.31
MDH3YDL078C PUF6Q04373 656 aaKnown RBP6.88□□□□□ -1.31
MDH3YDL078C AIM44Q99299 758 aa6.88□□□□□ -1.31
MDH3YDL078C GSC2P40989 1895 aa6.87□□□□□ -1.31
MDH3YDL078C DBP1P24784 617 aaKnown RBP6.87□□□□□ -1.31
MDH3YDL078C PTK1P36002 662 aaPredicted RBP6.87□□□□□ -1.31
MDH3YDL078C YIR042CP40586 236 aa6.87□□□□□ -1.31
MDH3YDL078C KRI1P42846 591 aaKnown RBP6.87□□□□□ -1.31
MDH3YDL078C APL6P46682 809 aa6.87□□□□□ -1.31
MDH3YDL078C INM2Q05533 292 aa6.87□□□□□ -1.31
MDH3YDL078C RPN7Q06103 429 aaKnown RBP6.87□□□□□ -1.31
MDH3YDL078C NCR1Q12200 1170 aa6.87□□□□□ -1.31
MDH3YDL078C HVG1P0CE11 249 aa6.86□□□□□ -1.31
MDH3YDL078C STS1P38637 319 aa6.86□□□□□ -1.31
MDH3YDL078C PNT1P38969 423 aa6.86□□□□□ -1.31
MDH3YDL078C ILV3P39522 585 aaKnown RBP6.86□□□□□ -1.31
MDH3YDL078C YGL242CP53066 181 aa6.86□□□□□ -1.31
MDH3YDL078C TIF6Q12522 245 aaKnown RBP6.86□□□□□ -1.31
MDH3YDL078C CSR2Q12734 1121 aa6.86□□□□□ -1.31
MDH3YDL078C CYB2P00175 591 aa6.85□□□□□ -1.31
MDH3YDL078C SNF3P10870 884 aa6.85□□□□□ -1.31
MDH3YDL078C MDL2P33311 773 aa6.85□□□□□ -1.31
MDH3YDL078C DEF1P35732 738 aaKnown RBP6.85□□□□□ -1.31
MDH3YDL078C PCS60P38137 543 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
MDH3YDL078C RIX1P38883 763 aaPredicted RBP6.85□□□□□ -1.31
MDH3YDL078C FUN12P39730 1002 aaKnown RBP6.85□□□□□ -1.31
MDH3YDL078C CLC1P17891 233 aa6.84□□□□□ -1.31
MDH3YDL078C NMD2P38798 1089 aaKnown RBP6.84□□□□□ -1.31
MDH3YDL078C MLC1P53141 149 aa6.84□□□□□ -1.31
MDH3YDL078C CWC22P53333 577 aaKnown RBP6.84□□□□□ -1.31
MDH3YDL078C SRF1Q12516 437 aa6.84□□□□□ -1.31
MDH3YDL078C RAD53P22216 821 aa6.83□□□□□ -1.32
MDH3YDL078C BOI1P38041 980 aaKnown RBP6.83□□□□□ -1.32
MDH3YDL078C TPS3P38426 1054 aaKnown RBP6.83□□□□□ -1.32
MDH3YDL078C RSC30P38781 883 aa6.83□□□□□ -1.32
MDH3YDL078C BDP1P46678 594 aa6.83□□□□□ -1.32
MDH3YDL078C PIP2P52960 996 aa6.83□□□□□ -1.32
MDH3YDL078C PDR18P53756 1333 aa6.82□□□□□ -1.32
MDH3YDL078C NOT3P06102 836 aaKnown RBP6.82□□□□□ -1.32
MDH3YDL078C NPL4P33755 580 aa6.82□□□□□ -1.32
MDH3YDL078C GEF1P37020 779 aa6.82□□□□□ -1.32
MDH3YDL078C EDS1P38073 919 aa6.82□□□□□ -1.32
MDH3YDL078C KTR3P38130 404 aaPredicted RBP6.82□□□□□ -1.32
MDH3YDL078C YNL035CP53962 389 aaKnown RBP6.82□□□□□ -1.32
MDH3YDL078C PCL8Q08966 492 aa6.82□□□□□ -1.32
MDH3YDL078C PMA1P05030 918 aaKnown RBP6.81□□□□□ -1.32
MDH3YDL078C PBS2P08018 668 aa6.81□□□□□ -1.32
MDH3YDL078C VMA1P17255 1071 aaKnown RBP6.81□□□□□ -1.32
MDH3YDL078C ADP1P25371 1049 aa6.81□□□□□ -1.32
MDH3YDL078C GRX7P38068 203 aa6.81□□□□□ -1.32
MDH3YDL078C DSF2P38213 736 aa6.81□□□□□ -1.32
MDH3YDL078C KEL1P38853 1164 aaKnown RBP6.81□□□□□ -1.32
MDH3YDL078C RBA50Q04418 439 aa6.81□□□□□ -1.32
MDH3YDL078C GIN4Q12263 1142 aa6.81□□□□□ -1.32
MDH3YDL078C SEC61P32915 480 aa6.8□□□□□ -1.32
MDH3YDL078C APE3P37302 537 aaKnown RBP6.8□□□□□ -1.32
MDH3YDL078C ECM21P38167 1117 aaKnown RBP6.8□□□□□ -1.32
MDH3YDL078C FPR3P38911 411 aaKnown RBP6.8□□□□□ -1.32
MDH3YDL078C MSH4P40965 878 aaPredicted RBP6.8□□□□□ -1.32
MDH3YDL078C ALO1P54783 526 aaKnown RBP6.8□□□□□ -1.32
MDH3YDL078C PFK2P16862 959 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
MDH3YDL078C MOT2P34909 587 aaKnown RBP6.79□□□□□ -1.32
MDH3YDL078C YBL028CP38202 106 aa6.79□□□□□ -1.32
MDH3YDL078C IOC3P43596 787 aa6.79□□□□□ -1.32
MDH3YDL078C NCS6P53088 359 aa6.79□□□□□ -1.32
MDH3YDL078C NSG2P53898 299 aa6.79□□□□□ -1.32
MDH3YDL078C PPM2Q08282 695 aa6.79□□□□□ -1.32
MDH3YDL078C FLO1P32768 1537 aa6.78□□□□□ -1.32
MDH3YDL078C KIN1P13185 1064 aa6.78□□□□□ -1.32
MDH3YDL078C PBY1P38254 753 aa6.78□□□□□ -1.32
MDH3YDL078C RFC1P38630 861 aaKnown RBP6.78□□□□□ -1.32
MDH3YDL078C OSH3P38713 996 aaKnown RBP6.78□□□□□ -1.32
MDH3YDL078C TFG1P41895 735 aaPredicted RBP6.78□□□□□ -1.32
MDH3YDL078C IRC8P47046 822 aa6.78□□□□□ -1.32
MDH3YDL078C ENP2P48234 707 aaKnown RBP6.78□□□□□ -1.32
MDH3YDL078C SNU71P53207 620 aaKnown RBP6.78□□□□□ -1.32
MDH3YDL078C JIP4Q03361 876 aa6.78□□□□□ -1.32
MDH3YDL078C CDC16P09798 840 aa6.77□□□□□ -1.33
MDH3YDL078C ECM16Q04217 1267 aaKnown RBP6.77□□□□□ -1.33
MDH3YDL078C BRE1Q07457 700 aaKnown RBP6.77□□□□□ -1.33
MDH3YDL078C KEL3Q08979 651 aaPredicted RBP6.77□□□□□ -1.33
MDH3YDL078C OCT1P35999 772 aa6.76□□□□□ -1.33
MDH3YDL078C ACA1P39970 489 aa6.76□□□□□ -1.33
MDH3YDL078C YMR147WP40218 223 aaKnown RBP6.76□□□□□ -1.33
MDH3YDL078C YGR130CP53278 816 aa6.76□□□□□ -1.33
MDH3YDL078C PEX29Q03370 554 aa6.76□□□□□ -1.33
MDH3YDL078C KAR5Q04746 504 aa6.76□□□□□ -1.33
MDH3YDL078C YDL124WQ07551 312 aaKnown RBP6.76□□□□□ -1.33
MDH3YDL078C YPL260WQ08977 551 aa6.76□□□□□ -1.33
MDH3YDL078C SAM3Q08986 587 aa6.76□□□□□ -1.33
MDH3YDL078C HSP82P02829 709 aaKnown RBP6.75□□□□□ -1.33
MDH3YDL078C MPH3P0CE00 602 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 99.9 ms