RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	AIM7	Q12156	149 aa		4.78	□□□□□ -1.64
CWH43	YCR017C	TRM44	Q02648	567 aa	Known RBP	4.78	□□□□□ -1.64
CWH43	YCR017C	JIP4	Q03361	876 aa		4.78	□□□□□ -1.64
CWH43	YCR017C	SNF3	P10870	884 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	RTG1	P32607	177 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	MOT2	P34909	587 aa	Known RBP	4.77	□□□□□ -1.65
CWH43	YCR017C	FLO11	P08640	1367 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	CDC16	P09798	840 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	PER1	P25625	357 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	TFG1	P41895	735 aa	Predicted RBP	4.77	□□□□□ -1.65
CWH43	YCR017C	NCS6	P53088	359 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	YAF9	P53930	226 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	FCP1	Q03254	732 aa		4.77	□□□□□ -1.65
CWH43	YCR017C	CLF1	Q12309	687 aa	Predicted RBP	4.77	□□□□□ -1.65
CWH43	YCR017C	OPI1	P21957	404 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	AFG2	P32794	780 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	NIT1	P40447	199 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	TY3A-G	Q12173	290 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	TY3A-I	Q99219	290 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	NET1	P47035	1189 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	MTC3	P53077	123 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	RBA50	Q04418	439 aa		4.76	□□□□□ -1.65
CWH43	YCR017C	SEC61	P32915	480 aa		4.75	□□□□□ -1.65
CWH43	YCR017C	TPS3	P38426	1054 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	SEC18	P18759	758 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
CWH43	YCR017C	PIP2	P52960	996 aa		4.75	□□□□□ -1.65
CWH43	YCR017C	RAD50	P12753	1312 aa		4.75	□□□□□ -1.65
CWH43	YCR017C	TPM1	P17536	199 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	HPR1	P17629	752 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	APE3	P37302	537 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	BOI1	P38041	980 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	YGL242C	P53066	181 aa		4.75	□□□□□ -1.65
CWH43	YCR017C	PUS6	P53294	404 aa		4.75	□□□□□ -1.65
CWH43	YCR017C	SEN54	Q02825	467 aa	Predicted RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	BRE1	Q07457	700 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	AIR2	Q12476	344 aa	Known RBP	4.75	□□□□□ -1.65
CWH43	YCR017C	CBP1	P07252	654 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	YEL023C	P39992	682 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	PTK2	P47116	818 aa	Known RBP	4.74	□□□□□ -1.65
CWH43	YCR017C	RRI2	Q12348	645 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	KIN1	P13185	1064 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	FUN12	P39730	1002 aa	Known RBP	4.74	□□□□□ -1.65
CWH43	YCR017C	VAB2	P40003	282 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	LYS14	P40971	790 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	DMA2	P53924	522 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	GAS5	Q08193	484 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	NCR1	Q12200	1170 aa		4.74	□□□□□ -1.65
CWH43	YCR017C	YKR018C	P36114	725 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	HAL5	P38970	855 aa	Known RBP	4.73	□□□□□ -1.65
CWH43	YCR017C	TAH18	Q12181	623 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	CAF20	P12962	161 aa	Known RBP	4.73	□□□□□ -1.65
CWH43	YCR017C	RAD53	P22216	821 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	TIM23	P32897	222 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	PTC4	P38089	393 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	ECM21	P38167	1117 aa	Known RBP	4.73	□□□□□ -1.65
CWH43	YCR017C	SPR3	P41901	512 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	PPM2	Q08282	695 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	GIN4	Q12263	1142 aa		4.73	□□□□□ -1.65
CWH43	YCR017C	ERG12	P07277	443 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	SPB4	P25808	606 aa	Predicted RBP	4.72	□□□□□ -1.65
CWH43	YCR017C	POL32	P47110	350 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	SOL4	P53315	255 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	KAR5	Q04746	504 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	SSF2	Q12153	453 aa	Predicted RBP	4.72	□□□□□ -1.65
CWH43	YCR017C	OCT1	P35999	772 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	CST26	P38226	397 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	TIF4631	P39935	952 aa	Known RBP	4.72	□□□□□ -1.65
CWH43	YCR017C	SPO1	P53541	631 aa		4.72	□□□□□ -1.65
CWH43	YCR017C	SUB2	Q07478	446 aa	Known RBP	4.72	□□□□□ -1.65
CWH43	YCR017C	RPS7A	P26786	190 aa	Known RBP	4.71	□□□□□ -1.65
CWH43	YCR017C	PTK1	P36002	662 aa	Predicted RBP	4.71	□□□□□ -1.65
CWH43	YCR017C	STV1	P37296	890 aa		4.71	□□□□□ -1.65
CWH43	YCR017C	SKG3	Q06315	1026 aa		4.71	□□□□□ -1.65
CWH43	YCR017C	BMT6	Q12291	365 aa		4.71	□□□□□ -1.65
CWH43	YCR017C	TUS1	Q06412	1307 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	ERG7	P38604	731 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	RTS1	P38903	757 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	AIM21	P40563	679 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	IRC8	P47046	822 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	YGR122W	P53272	402 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	PMA1	P05030	918 aa	Known RBP	4.71	□□□□□ -1.66
CWH43	YCR017C	NOT3	P06102	836 aa	Known RBP	4.71	□□□□□ -1.66
CWH43	YCR017C	ADP1	P25371	1049 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	FPR3	P38911	411 aa	Known RBP	4.71	□□□□□ -1.66
CWH43	YCR017C	INM2	Q05533	292 aa		4.71	□□□□□ -1.66
CWH43	YCR017C	YLR225C	Q05948	407 aa	Known RBP	4.71	□□□□□ -1.66
CWH43	YCR017C	SWC3	P31376	625 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	NMD2	P38798	1089 aa	Known RBP	4.7	□□□□□ -1.66
CWH43	YCR017C	MXR1	P40029	184 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	VPS4	P52917	437 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	RAD61	Q99359	647 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
CWH43	YCR017C	YNL193W	P53870	558 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	TOS4	Q06266	489 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	ICL2	Q12031	575 aa		4.7	□□□□□ -1.66
CWH43	YCR017C	DAN4	P47179	1161 aa		4.69	□□□□□ -1.66
CWH43	YCR017C	YPL260W	Q08977	551 aa		4.69	□□□□□ -1.66
CWH43	YCR017C	CDC60	P26637	1090 aa	Known RBP	4.69	□□□□□ -1.66
CWH43	YCR017C	MDL2	P33311	773 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms