RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W TY2B-FP0CX63 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-GR2P0CX64 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-CP25384 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-DR2Q03494 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY1B-DR1Q03855 1755 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-DR3Q07791 1770 aaKnown RBP3.61□□□□□ -1.83
SPB1YCL054W TY2B-OR1Q12113 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-DR1Q12472 1770 aa3.61□□□□□ -1.83
SPB1YCL054W TY2B-OR2Q12501 1770 aa3.61□□□□□ -1.83
SPB1YCL054W CYC8P14922 966 aa3.61□□□□□ -1.83
SPB1YCL054W MDJ1P35191 511 aa3.61□□□□□ -1.83
SPB1YCL054W NRD1P53617 575 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SPB1YCL054W CDC25P04821 1589 aa3.61□□□□□ -1.83
SPB1YCL054W DAL1P32375 460 aa3.61□□□□□ -1.83
SPB1YCL054W CDC55Q00362 526 aa3.61□□□□□ -1.83
SPB1YCL054W FOX2Q02207 900 aaKnown RBP3.61□□□□□ -1.83
SPB1YCL054W RPN4Q03465 531 aa3.61□□□□□ -1.83
SPB1YCL054W HXK1P04806 485 aaKnown RBP3.6□□□□□ -1.83
SPB1YCL054W YGR122WP53272 402 aa3.6□□□□□ -1.83
SPB1YCL054W UFD2P54860 961 aa3.6□□□□□ -1.83
SPB1YCL054W RMD1Q03441 430 aa3.6□□□□□ -1.83
SPB1YCL054W NSE3Q05541 303 aa3.6□□□□□ -1.83
SPB1YCL054W ESC1Q03661 1658 aaKnown RBP3.6□□□□□ -1.83
SPB1YCL054W MRPL33P20084 86 aa3.6□□□□□ -1.83
SPB1YCL054W FAA3P39002 694 aa3.6□□□□□ -1.83
SPB1YCL054W YNR014WP53719 212 aa3.6□□□□□ -1.83
SPB1YCL054W YNL011CP53980 444 aa3.6□□□□□ -1.83
SPB1YCL054W NAM8Q00539 523 aaKnown RBP3.6□□□□□ -1.83
SPB1YCL054W RSC4Q02206 625 aa3.6□□□□□ -1.83
SPB1YCL054W DNF1P32660 1571 aa3.59□□□□□ -1.83
SPB1YCL054W TOP2P06786 1428 aaKnown RBP3.59□□□□□ -1.83
SPB1YCL054W UTR2P32623 467 aa3.59□□□□□ -1.83
SPB1YCL054W ALA1P40825 983 aaKnown RBP3.59□□□□□ -1.83
SPB1YCL054W ALG12P53730 551 aa3.59□□□□□ -1.83
SPB1YCL054W KRE33P53914 1056 aaKnown RBP3.59□□□□□ -1.83
SPB1YCL054W RKR1Q04781 1562 aa3.59□□□□□ -1.83
SPB1YCL054W DIT1P21623 536 aa3.59□□□□□ -1.84
SPB1YCL054W VPS35P34110 944 aa3.59□□□□□ -1.84
SPB1YCL054W CWH41P53008 833 aa3.59□□□□□ -1.84
SPB1YCL054W TY1B-BRQ12193 1756 aa3.58□□□□□ -1.84
SPB1YCL054W TY1B-GR3Q12316 1755 aa3.58□□□□□ -1.84
SPB1YCL054W TY1B-ORQ92393 1755 aa3.58□□□□□ -1.84
SPB1YCL054W RAD2P07276 1031 aa3.58□□□□□ -1.84
SPB1YCL054W SRP40P32583 406 aaPredicted RBP3.58□□□□□ -1.84
SPB1YCL054W DUT1P33317 147 aa3.58□□□□□ -1.84
SPB1YCL054W SUT1P53032 299 aaKnown RBP3.58□□□□□ -1.84
SPB1YCL054W YMR187CQ03236 431 aa3.58□□□□□ -1.84
SPB1YCL054W BDF2Q07442 638 aa3.58□□□□□ -1.84
SPB1YCL054W WTM2Q12206 467 aa3.58□□□□□ -1.84
SPB1YCL054W POL1P13382 1468 aa3.58□□□□□ -1.84
SPB1YCL054W PAN1P32521 1480 aa3.58□□□□□ -1.84
SPB1YCL054W GCD6P32501 712 aaKnown RBP3.58□□□□□ -1.84
SPB1YCL054W CCT8P47079 568 aaKnown RBP3.58□□□□□ -1.84
SPB1YCL054W MSN5P52918 1224 aa3.58□□□□□ -1.84
SPB1YCL054W YNL165WP53891 406 aa3.58□□□□□ -1.84
SPB1YCL054W PPM2Q08282 695 aa3.58□□□□□ -1.84
SPB1YCL054W STU1P38198 1513 aa3.57□□□□□ -1.84
SPB1YCL054W PBP2P38151 413 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SPB1YCL054W MAD1P40957 749 aa3.57□□□□□ -1.84
SPB1YCL054W YDR461C-AQ2V2P7 80 aa3.57□□□□□ -1.84
SPB1YCL054W TY2B-BQ12491 1770 aa3.57□□□□□ -1.84
SPB1YCL054W VMA3P25515 160 aa3.56□□□□□ -1.84
SPB1YCL054W YKL091CP33324 310 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W RGD2P43556 714 aa3.56□□□□□ -1.84
SPB1YCL054W ESF1Q06344 628 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-DR3Q99231 1755 aa3.56□□□□□ -1.84
SPB1YCL054W MCM1P11746 286 aa3.56□□□□□ -1.84
SPB1YCL054W MNR2P35724 969 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-HO13535 1793 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-DR5P0C2I2 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-DR6P0C2I3 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-LR2P0C2I5 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-LR3P0C2I6 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-PR1P0C2I9 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-PR2P0C2J0 1756 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-PR3P0C2J1 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-JR1P47098 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-ML2Q03434 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-ER1Q03612 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-ML1Q04711 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W TY1B-GR2Q12269 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-OLQ12273 1755 aa3.56□□□□□ -1.84
SPB1YCL054W TY1B-PLQ12414 1755 aaKnown RBP3.56□□□□□ -1.84
SPB1YCL054W MMS22Q06164 1454 aa3.56□□□□□ -1.84
SPB1YCL054W MET5P47169 1442 aa3.56□□□□□ -1.84
SPB1YCL054W RPP1AP05318 106 aaPredicted RBP3.55□□□□□ -1.84
SPB1YCL054W CLN2P20438 545 aa3.55□□□□□ -1.84
SPB1YCL054W PEP7P32609 515 aa3.55□□□□□ -1.84
SPB1YCL054W UGA4P32837 571 aa3.55□□□□□ -1.84
SPB1YCL054W PPG1P32838 368 aa3.55□□□□□ -1.84
SPB1YCL054W RRP14P36080 434 aaKnown RBP3.55□□□□□ -1.84
SPB1YCL054W HXT8P40886 569 aa3.55□□□□□ -1.84
SPB1YCL054W YJL049WP47048 450 aa3.55□□□□□ -1.84
SPB1YCL054W CTR9P89105 1077 aa3.55□□□□□ -1.84
SPB1YCL054W SYT1Q06836 1226 aa3.55□□□□□ -1.84
SPB1YCL054W STI1P15705 589 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SPB1YCL054W FPS1P23900 669 aa3.55□□□□□ -1.84
SPB1YCL054W GRX1P25373 110 aaKnown RBP3.55□□□□□ -1.84
SPB1YCL054W PET112P33893 541 aa3.55□□□□□ -1.84
SPB1YCL054W FAA4P47912 694 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms