RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	POM152	P39685	1337 aa		5.86	□□□□□ -1.47
PDI1	YCL043C	MRC1	P25588	1096 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	MGM1	P32266	881 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	GLO3	P38682	493 aa	Known RBP	5.85	□□□□□ -1.47
PDI1	YCL043C	STM1	P39015	273 aa	Known RBP	5.85	□□□□□ -1.47
PDI1	YCL043C	ICP55	P40051	511 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	CWH41	P53008	833 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	APC11	Q12157	165 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	RRI2	Q12348	645 aa		5.85	□□□□□ -1.47
PDI1	YCL043C	CAF20	P12962	161 aa	Known RBP	5.84	□□□□□ -1.47
PDI1	YCL043C	ELM1	P32801	640 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	AIM9	P40053	627 aa	Known RBP	5.84	□□□□□ -1.47
PDI1	YCL043C	YGL081W	P53156	320 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	TIM50	Q02776	476 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	TFB3	Q03290	321 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	PRP3	Q03338	469 aa	Predicted RBP	5.84	□□□□□ -1.47
PDI1	YCL043C	SRC1	Q03707	834 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	DPH6	Q12429	685 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	YOL087C	Q99247	1116 aa		5.84	□□□□□ -1.47
PDI1	YCL043C	PET111	P08468	800 aa		5.84	□□□□□ -1.48
PDI1	YCL043C	SRP54	P20424	541 aa	Known RBP	5.84	□□□□□ -1.48
PDI1	YCL043C	FRD1	P32614	470 aa	Known RBP	5.84	□□□□□ -1.48
PDI1	YCL043C	UGA2	P38067	497 aa		5.84	□□□□□ -1.48
PDI1	YCL043C	OSH3	P38713	996 aa	Known RBP	5.84	□□□□□ -1.48
PDI1	YCL043C	SPL2	P38839	148 aa		5.84	□□□□□ -1.48
PDI1	YCL043C	NUP42	P49686	430 aa	Known RBP	5.84	□□□□□ -1.48
PDI1	YCL043C	PIF1	P07271	859 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	OPI1	P21957	404 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	BYE1	P36106	594 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	RTT107	P38850	1070 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	YMR147W	P40218	223 aa	Known RBP	5.83	□□□□□ -1.48
PDI1	YCL043C	BBC1	P47068	1157 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	PKH3	Q03306	898 aa	Predicted RBP	5.83	□□□□□ -1.48
PDI1	YCL043C	SML1	Q04964	104 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	LAM4	P38800	1345 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	PMD1	P32634	1753 aa		5.83	□□□□□ -1.48
PDI1	YCL043C	SPT2	P06843	333 aa	Predicted RBP	5.82	□□□□□ -1.48
PDI1	YCL043C	SIT4	P20604	311 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	MSH1	P25846	959 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	SWE1	P32944	819 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	MFT1	P33441	392 aa	Known RBP	5.82	□□□□□ -1.48
PDI1	YCL043C	DID4	P36108	232 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	YGL140C	P53120	1219 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	IRC3	Q06683	689 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	PEX19	Q07418	342 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	TFC8	Q12308	588 aa		5.82	□□□□□ -1.48
PDI1	YCL043C	HSP82	P02829	709 aa	Known RBP	5.81	□□□□□ -1.48
PDI1	YCL043C	KRE2	P27809	442 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	SWI3	P32591	825 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	PFF1	P38244	976 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	SIC1	P38634	284 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	VPS41	P38959	992 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	CCT5	P40413	562 aa	Known RBP	5.81	□□□□□ -1.48
PDI1	YCL043C	SPO22	P40511	975 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	RPT4	P53549	437 aa	Known RBP	5.81	□□□□□ -1.48
PDI1	YCL043C	SAS4	Q04003	481 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	TOM1	Q03280	3268 aa		5.81	□□□□□ -1.48
PDI1	YCL043C	TPM1	P17536	199 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	MAK11	P20484	414 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	LCB1	P25045	558 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	SMY1	P32364	656 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	CIC1	P38779	376 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	YIR042C	P40586	236 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	ATF2	P53296	535 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	KAR5	Q04746	504 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	INM2	Q05533	292 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	GIN4	Q12263	1142 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	PGA3	Q12746	312 aa	Known RBP	5.8	□□□□□ -1.48
PDI1	YCL043C	MRM1	P25270	412 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	MSH3	P25336	1018 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	MNR2	P35724	969 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	GRX7	P38068	203 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	IRC4	Q03036	179 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	ERO1	Q03103	563 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	YMR102C	Q03177	834 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	VPS72	Q03388	795 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	PLP2	Q12017	286 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	TAH18	Q12181	623 aa		5.8	□□□□□ -1.48
PDI1	YCL043C	FIG2	P25653	1609 aa		5.79	□□□□□ -1.48
PDI1	YCL043C	SES1	P07284	462 aa	Known RBP	5.79	□□□□□ -1.48
PDI1	YCL043C	NPR3	P38742	1146 aa		5.79	□□□□□ -1.48
PDI1	YCL043C	VID28	P40547	921 aa		5.79	□□□□□ -1.48
PDI1	YCL043C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
PDI1	YCL043C	PPM2	Q08282	695 aa		5.79	□□□□□ -1.48
PDI1	YCL043C	CYB2	P00175	591 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	RPL19A	P0CX82	189 aa	Known RBP	5.78	□□□□□ -1.48
PDI1	YCL043C	RPL19B	P0CX83	189 aa	Predicted RBP	5.78	□□□□□ -1.48
PDI1	YCL043C	ATE1	P16639	503 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	PKC1	P24583	1151 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	PEP3	P27801	918 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	RPT3	P33298	428 aa	Known RBP	5.78	□□□□□ -1.48
PDI1	YCL043C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
PDI1	YCL043C	MET1	P36150	593 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	ERT1	P38140	529 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	IRC8	P47046	822 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	PRP31	P49704	494 aa	Predicted RBP	5.78	□□□□□ -1.48
PDI1	YCL043C	VPS4	P52917	437 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	MSN5	P52918	1224 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	PEX14	P53112	341 aa		5.78	□□□□□ -1.48
PDI1	YCL043C	COG4	Q06096	861 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms