RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIF2	YBR103W	MST1	P07236	462 aa		5.85	□□□□□ -1.47
SIF2	YBR103W	HAP4	P14064	554 aa		5.85	□□□□□ -1.47
SIF2	YBR103W	PHO87	P25360	923 aa		5.85	□□□□□ -1.47
SIF2	YBR103W	MPP10	P47083	593 aa	Known RBP	5.85	□□□□□ -1.47
SIF2	YBR103W	ATG1	P53104	897 aa		5.85	□□□□□ -1.47
SIF2	YBR103W	DOS2	P54858	310 aa		5.85	□□□□□ -1.47
SIF2	YBR103W	LPD1	P09624	499 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	SER1	P33330	395 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	PFF1	P38244	976 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	MGE1	P38523	228 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	GYP7	P48365	746 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	HEF3	P53978	1044 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	RAT1	Q02792	1006 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	OYE2	Q03558	400 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	PNP1	Q05788	311 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	RTT109	Q07794	436 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	BMS1	Q08965	1183 aa	Known RBP	5.84	□□□□□ -1.47
SIF2	YBR103W	WHI5	Q12416	295 aa		5.84	□□□□□ -1.47
SIF2	YBR103W	COQ4	O13525	335 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	FUR4	P05316	633 aa	Known RBP	5.83	□□□□□ -1.48
SIF2	YBR103W	KEX2	P13134	814 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	SPC42	P36094	363 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	SMC3	P47037	1230 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	KIN4	Q01919	800 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	DPL1	Q05567	589 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	DIB1	Q06819	143 aa	Predicted RBP	5.83	□□□□□ -1.48
SIF2	YBR103W	YDL144C	Q07589	356 aa		5.83	□□□□□ -1.48
SIF2	YBR103W	SSK22	P25390	1331 aa	Predicted RBP	5.83	□□□□□ -1.48
SIF2	YBR103W	RPP0	P05317	312 aa	Known RBP	5.82	□□□□□ -1.48
SIF2	YBR103W	PTC4	P38089	393 aa		5.82	□□□□□ -1.48
SIF2	YBR103W	PIL1	P53252	339 aa	Known RBP	5.82	□□□□□ -1.48
SIF2	YBR103W	JIP5	Q06214	492 aa	Predicted RBP	5.82	□□□□□ -1.48
SIF2	YBR103W	YOL057W	Q08225	711 aa		5.82	□□□□□ -1.48
SIF2	YBR103W	SEC8	P32855	1065 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	YER156C	P40093	338 aa	Known RBP	5.81	□□□□□ -1.48
SIF2	YBR103W	MSH4	P40965	878 aa	Predicted RBP	5.81	□□□□□ -1.48
SIF2	YBR103W	YGL082W	P53155	381 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	STE20	Q03497	939 aa	Known RBP	5.81	□□□□□ -1.48
SIF2	YBR103W	CTI6	Q08923	506 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	TEC1	P18412	486 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	GLO3	P38682	493 aa	Known RBP	5.81	□□□□□ -1.48
SIF2	YBR103W	BOL3	P39724	118 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	CWH41	P53008	833 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	YNL011C	P53980	444 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	PUN1	Q06991	263 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	RLP24	Q07915	199 aa	Known RBP	5.81	□□□□□ -1.48
SIF2	YBR103W	YDL206W	Q12424	762 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	PMD1	P32634	1753 aa		5.81	□□□□□ -1.48
SIF2	YBR103W	SRS2	P12954	1174 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	GUT2	P32191	649 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	CST6	P40535	587 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	YJR008W	P47085	338 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	ACS2	P52910	683 aa	Known RBP	5.8	□□□□□ -1.48
SIF2	YBR103W	ERO1	Q03103	563 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	BDF2	Q07442	638 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	STB3	Q12427	513 aa		5.8	□□□□□ -1.48
SIF2	YBR103W	RPS9B	P05755	195 aa	Known RBP	5.79	□□□□□ -1.48
SIF2	YBR103W	ROX1	P25042	368 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	TPD3	P31383	635 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	NUD1	P32336	851 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	SMY1	P32364	656 aa	Known RBP	5.79	□□□□□ -1.48
SIF2	YBR103W	NPL4	P33755	580 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	QDR1	P40475	563 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	ROM1	P53046	1155 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	YAF9	P53930	226 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	DNM1	P54861	757 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	YDR306C	Q06640	478 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	FRA1	Q07825	749 aa		5.79	□□□□□ -1.48
SIF2	YBR103W	APL2	P36000	726 aa	Predicted RBP	5.78	□□□□□ -1.48
SIF2	YBR103W	EAP1	P36041	632 aa	Known RBP	5.78	□□□□□ -1.48
SIF2	YBR103W	SOH1	P38633	127 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	ZDS2	P54786	942 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	SRT1	Q03175	343 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	UTP13	Q05946	817 aa	Known RBP	5.78	□□□□□ -1.48
SIF2	YBR103W	NUT2	Q06213	157 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	ERF2	Q06551	359 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	ISU2	Q12056	156 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	SWI1	P09547	1314 aa		5.78	□□□□□ -1.48
SIF2	YBR103W	VPS27	P40343	622 aa	Known RBP	5.77	□□□□□ -1.48
SIF2	YBR103W	ACF4	P47129	309 aa		5.77	□□□□□ -1.48
SIF2	YBR103W	YJR107W	P47145	328 aa		5.77	□□□□□ -1.48
SIF2	YBR103W	NNF2	P53253	936 aa		5.77	□□□□□ -1.48
SIF2	YBR103W	UBP16	Q02863	499 aa		5.77	□□□□□ -1.48
SIF2	YBR103W	MPC54	Q08550	464 aa		5.77	□□□□□ -1.48
SIF2	YBR103W	SUI2	P20459	304 aa	Known RBP	5.77	□□□□□ -1.49
SIF2	YBR103W	VAN1	P23642	535 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	RPS0A	P32905	252 aa	Known RBP	5.77	□□□□□ -1.49
SIF2	YBR103W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
SIF2	YBR103W	MET1	P36150	593 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	YBR287W	P38355	427 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	JIP4	Q03361	876 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	VPS64	Q03944	604 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	IRC3	Q06683	689 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	YOL098C	Q12496	1037 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	TSC13	Q99190	310 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	HKR1	P41809	1802 aa		5.77	□□□□□ -1.49
SIF2	YBR103W	RAD26	P40352	1085 aa		5.76	□□□□□ -1.49
SIF2	YBR103W	RPA14	P50106	137 aa		5.76	□□□□□ -1.49
SIF2	YBR103W	FAR11	P53917	953 aa		5.76	□□□□□ -1.49
SIF2	YBR103W	SYF1	Q04048	859 aa	Predicted RBP	5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms