RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
KCNMA1-238ENST00000638514 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-238ENST00000638514 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-238ENST00000638514 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
KCNMA1-238ENST00000638514 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 TRIM27P14373 513 aa16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 KLHL40Q2TBA0 621 aa16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 TRPM2O94759 1503 aa16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-238ENST00000638514 SSFA2P28290 1259 aa16.96■□□□□ 0.31
KCNMA1-238ENST00000638514 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
KCNMA1-238ENST00000638514 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
KCNMA1-238ENST00000638514 ZHX1Q9UKY1 873 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-238ENST00000638514 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
KCNMA1-238ENST00000638514 PDE4CQ08493 712 aa16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 NUCB1Q02818 461 aa16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 R3HCC1Q9Y3T6 440 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
KCNMA1-238ENST00000638514 KIF2CQ99661 725 aa16.94■□□□□ 0.3
KCNMA1-238ENST00000638514 HS1BP3Q53T59 392 aa16.94■□□□□ 0.3
KCNMA1-238ENST00000638514 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
KCNMA1-238ENST00000638514 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
KCNMA1-238ENST00000638514 MTHFSP49914 203 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 CLTCL1P53675 1640 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 EXOSC9Q06265 439 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 SSH1Q8WYL5 1049 aa16.93■□□□□ 0.3
KCNMA1-238ENST00000638514 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
KCNMA1-238ENST00000638514 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
KCNMA1-238ENST00000638514 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
KCNMA1-238ENST00000638514 TMEM57Q8N5G2 664 aa16.92■□□□□ 0.3
KCNMA1-238ENST00000638514 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
KCNMA1-238ENST00000638514 PTPRTO14522 1441 aa16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 ZNF445P59923 1031 aa16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 APBB1O00213 710 aa16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 NOL7Q9UMY1 257 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-238ENST00000638514 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
KCNMA1-238ENST00000638514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
KCNMA1-238ENST00000638514 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
KCNMA1-238ENST00000638514 UQCRHP07919 91 aa16.89■□□□□ 0.29
KCNMA1-238ENST00000638514 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
KCNMA1-238ENST00000638514 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
KCNMA1-238ENST00000638514 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
KCNMA1-238ENST00000638514 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
KCNMA1-238ENST00000638514 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
KCNMA1-238ENST00000638514 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
KCNMA1-238ENST00000638514 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 SMAP1Q8IYB5 467 aaPredicted RBP16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 FBLN1P23142 703 aa16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 XPCQ01831 940 aaPredicted RBP16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 ZSCAN23Q3MJ62 389 aa16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-238ENST00000638514 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 CFAP74Q9C0B2 1584 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 ABCA6Q8N139 1617 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 PDLIM2Q96JY6 352 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 CSPP1Q1MSJ5 1256 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 ADGRB2O60241 1585 aa16.86■□□□□ 0.29
KCNMA1-238ENST00000638514 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
KCNMA1-238ENST00000638514 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
KCNMA1-238ENST00000638514 RBSNQ9H1K0 784 aa16.85■□□□□ 0.29
KCNMA1-238ENST00000638514 NUCB2P80303 420 aa16.85■□□□□ 0.29
KCNMA1-238ENST00000638514 MYOM2P54296 1465 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 NOS1P29475 1434 aa16.84■□□□□ 0.29
KCNMA1-238ENST00000638514 MYO3AQ8NEV4 1616 aa16.83■□□□□ 0.29
KCNMA1-238ENST00000638514 LMBRD1Q9NUN5 540 aa16.83■□□□□ 0.28
KCNMA1-238ENST00000638514 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
KCNMA1-238ENST00000638514 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
KCNMA1-238ENST00000638514 MCM5P33992 734 aa16.82■□□□□ 0.28
KCNMA1-238ENST00000638514 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
KCNMA1-238ENST00000638514 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
KCNMA1-238ENST00000638514 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
KCNMA1-238ENST00000638514 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-238ENST00000638514 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
KCNMA1-238ENST00000638514 HMOX1P09601 288 aa16.81■□□□□ 0.28
KCNMA1-238ENST00000638514 RABEP1Q15276 862 aa16.81■□□□□ 0.28
KCNMA1-238ENST00000638514 CDC45O75419 566 aa16.81■□□□□ 0.28
KCNMA1-238ENST00000638514 IL16Q14005 1332 aa16.8■□□□□ 0.28
KCNMA1-238ENST00000638514 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
KCNMA1-238ENST00000638514 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
KCNMA1-238ENST00000638514 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
KCNMA1-238ENST00000638514 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms