RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 DDIT3P35638 169 aa18.87■□□□□ 0.61
THUMPD1-206ENST00000636554 TMPOP42166 694 aaKnown RBP18.87■□□□□ 0.61
THUMPD1-206ENST00000636554 LNPKQ9C0E8 428 aa18.87■□□□□ 0.61
THUMPD1-206ENST00000636554 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
THUMPD1-206ENST00000636554 DDX11L8A8MPP1 907 aa18.86■□□□□ 0.61
THUMPD1-206ENST00000636554 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
THUMPD1-206ENST00000636554 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
THUMPD1-206ENST00000636554 GLI2P10070 1586 aa18.85■□□□□ 0.61
THUMPD1-206ENST00000636554 ZBTB40Q9NUA8 1239 aa18.85■□□□□ 0.61
THUMPD1-206ENST00000636554 KIDINS220Q9ULH0 1771 aa18.85■□□□□ 0.61
THUMPD1-206ENST00000636554 ERBB4Q15303 1308 aa18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 NPATQ14207 1427 aa18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 TNPO1Q92973 898 aaKnown RBP18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 RBM25P49756 843 aaKnown RBP18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
THUMPD1-206ENST00000636554 GGNBP2Q9H3C7 697 aa18.83■□□□□ 0.6
THUMPD1-206ENST00000636554 NSD2O96028 1365 aa18.83■□□□□ 0.6
THUMPD1-206ENST00000636554 EVC2Q86UK5 1308 aa18.83■□□□□ 0.6
THUMPD1-206ENST00000636554 NUCB1Q02818 461 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 COL3A1P02461 1466 aaPredicted RBP18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 GAS2L3Q86XJ1 694 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 A0A1W2PP64 1363 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
THUMPD1-206ENST00000636554 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
THUMPD1-206ENST00000636554 SNX21Q969T3 373 aa18.8■□□□□ 0.6
THUMPD1-206ENST00000636554 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
THUMPD1-206ENST00000636554 RIPK4P57078 832 aa18.79■□□□□ 0.6
THUMPD1-206ENST00000636554 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
THUMPD1-206ENST00000636554 KIF2CQ99661 725 aa18.79■□□□□ 0.6
THUMPD1-206ENST00000636554 CAMSAP1Q5T5Y3 1602 aa18.78■□□□□ 0.6
THUMPD1-206ENST00000636554 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
THUMPD1-206ENST00000636554 GGT6Q6P531 493 aa18.78■□□□□ 0.6
THUMPD1-206ENST00000636554 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
THUMPD1-206ENST00000636554 ESPNB1AK53 854 aa18.77■□□□□ 0.6
THUMPD1-206ENST00000636554 RAB3GAP1Q15042 981 aa18.77■□□□□ 0.6
THUMPD1-206ENST00000636554 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
THUMPD1-206ENST00000636554 BMP2KLQ5H9B9 411 aa18.75■□□□□ 0.59
THUMPD1-206ENST00000636554 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 IL16Q14005 1332 aa18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 GBP4Q96PP9 640 aa18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 IPO8O15397 1037 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 ANKRD45Q5TZF3 282 aa18.74■□□□□ 0.59
THUMPD1-206ENST00000636554 STK26Q9P289 416 aa18.73■□□□□ 0.59
THUMPD1-206ENST00000636554 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
THUMPD1-206ENST00000636554 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
THUMPD1-206ENST00000636554 MED14O60244 1454 aa18.73■□□□□ 0.59
THUMPD1-206ENST00000636554 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
THUMPD1-206ENST00000636554 TBC1D9Q6ZT07 1266 aa18.72■□□□□ 0.59
THUMPD1-206ENST00000636554 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
THUMPD1-206ENST00000636554 FYB1O15117 783 aa18.72■□□□□ 0.59
THUMPD1-206ENST00000636554 PUS7Q96PZ0 661 aaKnown RBP18.72■□□□□ 0.59
THUMPD1-206ENST00000636554 AK9Q5TCS8 1911 aa18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 TRIM44Q96DX7 344 aaPredicted RBP18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 SSFA2P28290 1259 aa18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 RPGRIP1LQ68CZ1 1315 aa18.71■□□□□ 0.59
THUMPD1-206ENST00000636554 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 K7ELQ4 463 aaPredicted RBP18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 ANKRD26Q9UPS8 1709 aa18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 DIAPH1O60610 1272 aaKnown RBP18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
THUMPD1-206ENST00000636554 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
THUMPD1-206ENST00000636554 ZBTB7BO15156 539 aaPredicted RBP18.69■□□□□ 0.58
THUMPD1-206ENST00000636554 CD163L1Q9NR16 1453 aa18.68■□□□□ 0.58
THUMPD1-206ENST00000636554 FBLN1P23142 703 aa18.68■□□□□ 0.58
THUMPD1-206ENST00000636554 MINK1Q8N4C8 1332 aaPredicted RBP18.68■□□□□ 0.58
THUMPD1-206ENST00000636554 HSP90AA2PQ14568 343 aaPredicted RBP18.68■□□□□ 0.58
THUMPD1-206ENST00000636554 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
THUMPD1-206ENST00000636554 ABCC3O15438 1527 aa18.67■□□□□ 0.58
THUMPD1-206ENST00000636554 TSPYL6Q8N831 410 aa18.67■□□□□ 0.58
THUMPD1-206ENST00000636554 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
THUMPD1-206ENST00000636554 SKOR2Q2VWA4 1001 aaPredicted RBP18.66■□□□□ 0.58
THUMPD1-206ENST00000636554 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
THUMPD1-206ENST00000636554 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
THUMPD1-206ENST00000636554 ASXL2Q76L83 1435 aa18.66■□□□□ 0.58
THUMPD1-206ENST00000636554 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
THUMPD1-206ENST00000636554 PIK3C2BO00750 1634 aa18.64■□□□□ 0.58
THUMPD1-206ENST00000636554 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
THUMPD1-206ENST00000636554 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 FAM135BQ49AJ0 1406 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 RRP9O43818 475 aaKnown RBP18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 VAMP4O75379 141 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 HMOX1P09601 288 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
THUMPD1-206ENST00000636554 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
THUMPD1-206ENST00000636554 PTPRMP28827 1452 aa18.62■□□□□ 0.57
THUMPD1-206ENST00000636554 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
THUMPD1-206ENST00000636554 ATAD2Q6PL18 1390 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms