RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TRIM35	Q9UPQ4	493 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644	RPGRIP1L	Q68CZ1	1315 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644	FSD2	A1L4K1	749 aa		18.21	■□□□□ 0.51
SMTN-223	ENST00000619644	THUMPD2	Q9BTF0	503 aa	Known RBP	18.21	■□□□□ 0.51
SMTN-223	ENST00000619644	FYB1	O15117	783 aa		18.21	■□□□□ 0.51
SMTN-223	ENST00000619644	CLCN1	P35523	988 aa		18.21	■□□□□ 0.51
SMTN-223	ENST00000619644	C1orf115	Q9H7X2	142 aa		18.21	■□□□□ 0.51
SMTN-223	ENST00000619644	CABP1	Q9NZU7	370 aa		18.2	■□□□□ 0.5
SMTN-223	ENST00000619644	KIDINS220	Q9ULH0	1771 aa		18.2	■□□□□ 0.5
SMTN-223	ENST00000619644	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.2	■□□□□ 0.5
SMTN-223	ENST00000619644	SHPRH	Q149N8	1683 aa		18.19	■□□□□ 0.5
SMTN-223	ENST00000619644	ADGRB3	O60242	1522 aa		18.19	■□□□□ 0.5
SMTN-223	ENST00000619644	IQSEC2	Q5JU85	1478 aa		18.19	■□□□□ 0.5
SMTN-223	ENST00000619644	FOXD4L1	Q9NU39	408 aa		18.19	■□□□□ 0.5
SMTN-223	ENST00000619644	MCM4	P33991	863 aa		18.18	■□□□□ 0.5
SMTN-223	ENST00000619644	HSCB	Q8IWL3	235 aa		18.18	■□□□□ 0.5
SMTN-223	ENST00000619644	NRXN1	Q9ULB1	1477 aa		18.18	■□□□□ 0.5
SMTN-223	ENST00000619644	PRKAR2B	P31323	418 aa		18.18	■□□□□ 0.5
SMTN-223	ENST00000619644	IPO8	O15397	1037 aa	Known RBP	18.17	■□□□□ 0.5
SMTN-223	ENST00000619644	HSP90AA1	P07900	732 aa	Known RBP	18.17	■□□□□ 0.5
SMTN-223	ENST00000619644	PLEKHF1	Q96S99	279 aa		18.17	■□□□□ 0.5
SMTN-223	ENST00000619644	ANKRD45	Q5TZF3	282 aa		18.16	■□□□□ 0.5
SMTN-223	ENST00000619644	VSIG10	Q8N0Z9	540 aa		18.16	■□□□□ 0.5
SMTN-223	ENST00000619644	CDK19	Q9BWU1	502 aa		18.16	■□□□□ 0.5
SMTN-223	ENST00000619644	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.15	■□□□□ 0.5
SMTN-223	ENST00000619644	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.15	■□□□□ 0.5
SMTN-223	ENST00000619644	ADGRB1	O14514	1584 aa		18.15	■□□□□ 0.5
SMTN-223	ENST00000619644	NSD2	O96028	1365 aa		18.14	■□□□□ 0.49
SMTN-223	ENST00000619644	IFT172	Q9UG01	1749 aa		18.13	■□□□□ 0.49
SMTN-223	ENST00000619644	SETBP1	Q9Y6X0	1596 aa		18.13	■□□□□ 0.49
SMTN-223	ENST00000619644	TULP4	Q9NRJ4	1543 aa		18.13	■□□□□ 0.49
SMTN-223	ENST00000619644	WAPL	Q7Z5K2	1190 aa		18.13	■□□□□ 0.49
SMTN-223	ENST00000619644	GLI2	P10070	1586 aa		18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	KIF16B	Q96L93	1317 aa		18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	CT47B1	P0C2W7	299 aa	Predicted RBP	18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	MYO3A	Q8NEV4	1616 aa		18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	RRP9	O43818	475 aa	Known RBP	18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	TRAK2	O60296	914 aa		18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	HSP90AB1	P08238	724 aa	Known RBP	18.12	■□□□□ 0.49
SMTN-223	ENST00000619644	HDAC1	Q13547	482 aa	Predicted RBP	18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	MLEC	Q14165	292 aa		18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	ZMYND15	Q9H091	742 aa		18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	POGZ	Q7Z3K3	1410 aa		18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	CHMP5	Q9NZZ3	219 aa		18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	ZBTB40	Q9NUA8	1239 aa		18.11	■□□□□ 0.49
SMTN-223	ENST00000619644	MRE11	P49959	708 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	ABCC11	Q96J66	1382 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	PPL	O60437	1756 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	NEURL4	Q96JN8	1562 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	ZMYM3	Q14202	1370 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	PHACTR3	Q96KR7	559 aa		18.1	■□□□□ 0.49
SMTN-223	ENST00000619644	CHD1L	Q86WJ1	897 aa		18.09	■□□□□ 0.49
SMTN-223	ENST00000619644	TSPYL6	Q8N831	410 aa		18.09	■□□□□ 0.49
SMTN-223	ENST00000619644	APBB1	O00213	710 aa		18.08	■□□□□ 0.49
SMTN-223	ENST00000619644	EMILIN1	Q9Y6C2	1016 aa		18.08	■□□□□ 0.49
SMTN-223	ENST00000619644	LMTK2	Q8IWU2	1503 aa		18.08	■□□□□ 0.48
SMTN-223	ENST00000619644	SMC5	Q8IY18	1101 aa		18.08	■□□□□ 0.48
SMTN-223	ENST00000619644	SLC52A1	Q9NWF4	448 aa		18.08	■□□□□ 0.48
SMTN-223	ENST00000619644	ABCC3	O15438	1527 aa		18.08	■□□□□ 0.48
SMTN-223	ENST00000619644	ATAD2	Q6PL18	1390 aa		18.08	■□□□□ 0.48
SMTN-223	ENST00000619644	GRPEL1	Q9HAV7	217 aa		18.07	■□□□□ 0.48
SMTN-223	ENST00000619644	OSCAR	Q8IYS5	282 aa		18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	PUS7	Q96PZ0	661 aa	Known RBP	18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	ZRANB1	Q9UGI0	708 aa		18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	SOX12	O15370	315 aa		18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	FCHSD2	O94868	740 aa		18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	DCTN1	Q14203	1278 aa		18.06	■□□□□ 0.48
SMTN-223	ENST00000619644	ESPN	B1AK53	854 aa		18.05	■□□□□ 0.48
SMTN-223	ENST00000619644	NUCB1	Q02818	461 aa		18.05	■□□□□ 0.48
SMTN-223	ENST00000619644	POLK	Q9UBT6	870 aa		18.05	■□□□□ 0.48
SMTN-223	ENST00000619644	ERBB4	Q15303	1308 aa		18.05	■□□□□ 0.48
SMTN-223	ENST00000619644	FRMPD1	Q5SYB0	1578 aa		18.04	■□□□□ 0.48
SMTN-223	ENST00000619644	RRS1	Q15050	365 aa	Known RBP	18.04	■□□□□ 0.48
SMTN-223	ENST00000619644	CAMSAP1	Q5T5Y3	1602 aa		18.04	■□□□□ 0.48
SMTN-223	ENST00000619644	FAM83G	A6ND36	823 aa		18.04	■□□□□ 0.48
SMTN-223	ENST00000619644	ZC3H13	Q5T200	1668 aa	Known RBP	18.03	■□□□□ 0.48
SMTN-223	ENST00000619644	NUTM2F	A1L443	756 aa		18.03	■□□□□ 0.48
SMTN-223	ENST00000619644	NME9	Q86XW9	330 aa		18.03	■□□□□ 0.48
SMTN-223	ENST00000619644	IL16	Q14005	1332 aa		18.03	■□□□□ 0.48
SMTN-223	ENST00000619644	MLH3	Q9UHC1	1453 aa		18.03	■□□□□ 0.48
SMTN-223	ENST00000619644	DDX11L8	A8MPP1	907 aa		18.02	■□□□□ 0.48
SMTN-223	ENST00000619644	NCKAP5L	Q9HCH0	1330 aa		18.02	■□□□□ 0.48
SMTN-223	ENST00000619644	RBM42	Q9BTD8	480 aa	Known RBP	18.02	■□□□□ 0.48
SMTN-223	ENST00000619644	HECW2	Q9P2P5	1572 aa		18.02	■□□□□ 0.47
SMTN-223	ENST00000619644	NFE2L2	Q16236	605 aa		18.01	■□□□□ 0.47
SMTN-223	ENST00000619644	TWISTNB	Q3B726	338 aa	Predicted RBP	18.01	■□□□□ 0.47
SMTN-223	ENST00000619644	ALDH1L2	Q3SY69	923 aa		18.01	■□□□□ 0.47
SMTN-223	ENST00000619644	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.01	■□□□□ 0.47
SMTN-223	ENST00000619644	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.01	■□□□□ 0.47
SMTN-223	ENST00000619644	NEXMIF	Q5QGS0	1516 aa		18	■□□□□ 0.47
SMTN-223	ENST00000619644	MBIP	Q9NS73	344 aa		18	■□□□□ 0.47
SMTN-223	ENST00000619644	VAMP4	O75379	141 aa		18	■□□□□ 0.47
SMTN-223	ENST00000619644	ZBTB7B	O15156	539 aa	Predicted RBP	17.99	■□□□□ 0.47
SMTN-223	ENST00000619644	ZNF692	Q9BU19	519 aa	Predicted RBP	17.99	■□□□□ 0.47
SMTN-223	ENST00000619644	YEATS2	Q9ULM3	1422 aa		17.99	■□□□□ 0.47
SMTN-223	ENST00000619644	GNAI1	P63096	354 aa		17.99	■□□□□ 0.47
SMTN-223	ENST00000619644	TRIM44	Q96DX7	344 aa	Predicted RBP	17.99	■□□□□ 0.47
SMTN-223	ENST00000619644	NCBP3	Q53F19	620 aa	Known RBP	17.98	■□□□□ 0.47
SMTN-223	ENST00000619644	TXNDC2	Q86VQ3	553 aa		17.98	■□□□□ 0.47
SMTN-223	ENST00000619644	C8orf58	Q8NAV2	365 aa		17.98	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms