RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
CDH1-212ENST00000611625 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
CDH1-212ENST00000611625 GAS2L2Q8NHY3 880 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 NUP160Q12769 1436 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 IGHDP01880 384 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 ERC2O15083 957 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 NPHP1O15259 732 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
CDH1-212ENST00000611625 MCM2P49736 904 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 NLRP6P59044 892 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 MBD3O95983 291 aa15.09■□□□□ 0.01
CDH1-212ENST00000611625 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDH1-212ENST00000611625 ANO8Q9HCE9 1232 aaPredicted RBP15.09■□□□□ 0.01
CDH1-212ENST00000611625 DDX58O95786 925 aaKnown RBP15.08■□□□□ 0.01
CDH1-212ENST00000611625 GNAI2P04899 355 aa15.08■□□□□ 0.01
CDH1-212ENST00000611625 RNF20Q5VTR2 975 aa15.08■□□□□ 0.01
CDH1-212ENST00000611625 GRPEL1Q9HAV7 217 aa15.08■□□□□ 0.01
CDH1-212ENST00000611625 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0
CDH1-212ENST00000611625 RNF214Q8ND24 703 aa15.08■□□□□ 0
CDH1-212ENST00000611625 ADAMTS12P58397 1594 aa15.08■□□□□ 0
CDH1-212ENST00000611625 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
CDH1-212ENST00000611625 TBC1D2Q9BYX2 928 aa15.08■□□□□ 0
CDH1-212ENST00000611625 GOLGA6L19H0YKK7 550 aa15.08■□□□□ 0
CDH1-212ENST00000611625 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
CDH1-212ENST00000611625 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0
CDH1-212ENST00000611625 ADGRL1O94910 1474 aa15.07■□□□□ 0
CDH1-212ENST00000611625 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
CDH1-212ENST00000611625 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
CDH1-212ENST00000611625 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
CDH1-212ENST00000611625 PER1O15534 1290 aaPredicted RBP15.06■□□□□ 0
CDH1-212ENST00000611625 TRIM27P14373 513 aa15.06■□□□□ 0
CDH1-212ENST00000611625 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
CDH1-212ENST00000611625 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
CDH1-212ENST00000611625 NOS1P29475 1434 aa15.06■□□□□ 0
CDH1-212ENST00000611625 BECN2A8MW95 431 aa15.06■□□□□ 0
CDH1-212ENST00000611625 CWC22Q9HCG8 908 aaKnown RBP15.06■□□□□ 0
CDH1-212ENST00000611625 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
CDH1-212ENST00000611625 CCDC173Q0VFZ6 552 aa15.06■□□□□ 0
CDH1-212ENST00000611625 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
CDH1-212ENST00000611625 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
CDH1-212ENST00000611625 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
CDH1-212ENST00000611625 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
CDH1-212ENST00000611625 PSME1Q06323 249 aa15.05■□□□□ -0
CDH1-212ENST00000611625 CNTROBQ8N137 903 aa15.05■□□□□ -0
CDH1-212ENST00000611625 RPAP2Q8IXW5 612 aaPredicted RBP15.04■□□□□ -0
CDH1-212ENST00000611625 BICD2Q8TD16 824 aa15.04■□□□□ -0
CDH1-212ENST00000611625 SHANK2Q9UPX8 1470 aa15.04■□□□□ -0
CDH1-212ENST00000611625 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
CDH1-212ENST00000611625 CLASRPQ8N2M8 674 aaKnown RBP15.04■□□□□ -0
CDH1-212ENST00000611625 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
CDH1-212ENST00000611625 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
CDH1-212ENST00000611625 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
CDH1-212ENST00000611625 C14orf93Q9H972 538 aaKnown RBP15.04■□□□□ -0
CDH1-212ENST00000611625 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.04■□□□□ -0
CDH1-212ENST00000611625 NSD2O96028 1365 aa15.03■□□□□ -0
CDH1-212ENST00000611625 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
CDH1-212ENST00000611625 DUOX2Q9NRD8 1548 aa15.03■□□□□ -0
CDH1-212ENST00000611625 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
CDH1-212ENST00000611625 SAMD9Q5K651 1589 aa15.03■□□□□ -0
CDH1-212ENST00000611625 C8orf34Q49A92 452 aa15.03■□□□□ -0
CDH1-212ENST00000611625 TBC1D32Q96NH3 1257 aa15.03■□□□□ -0
CDH1-212ENST00000611625 LRRCC1Q9C099 1032 aa15.03■□□□□ -0
CDH1-212ENST00000611625 R3HCC1Q9Y3T6 440 aaKnown RBP15.02■□□□□ -0
CDH1-212ENST00000611625 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
CDH1-212ENST00000611625 CCDC61Q9Y6R9 512 aa15.01□□□□□ -0.01
CDH1-212ENST00000611625 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
CDH1-212ENST00000611625 PCDHB15Q9Y5E8 787 aa15.01□□□□□ -0.01
CDH1-212ENST00000611625 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
CDH1-212ENST00000611625 TOMM22Q9NS69 142 aa15□□□□□ -0.01
CDH1-212ENST00000611625 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
CDH1-212ENST00000611625 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
CDH1-212ENST00000611625 ADGRL2O95490 1459 aa15□□□□□ -0.01
CDH1-212ENST00000611625 ESPNB1AK53 854 aa15□□□□□ -0.01
CDH1-212ENST00000611625 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
CDH1-212ENST00000611625 FANCAO15360 1455 aa15□□□□□ -0.01
CDH1-212ENST00000611625 AIMP1Q12904 312 aaKnown RBP14.99□□□□□ -0.01
CDH1-212ENST00000611625 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
CDH1-212ENST00000611625 TSPY26PQ9H489 355 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 PLCH2O75038 1416 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 IDI1Q13907 227 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 RIC3Q7Z5B4 369 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 WAPLQ7Z5K2 1190 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 KDM5BQ9UGL1 1544 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
CDH1-212ENST00000611625 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
CDH1-212ENST00000611625 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
CDH1-212ENST00000611625 GCC2Q8IWJ2 1684 aa14.98□□□□□ -0.01
CDH1-212ENST00000611625 DCTN1Q14203 1278 aa14.98□□□□□ -0.01
CDH1-212ENST00000611625 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
CDH1-212ENST00000611625 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
CDH1-212ENST00000611625 PSMA5P28066 241 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 FSD1Q9BTV5 496 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms