RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
CNOT1-218ENST00000569732 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
CNOT1-218ENST00000569732 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
CNOT1-218ENST00000569732 E2F4Q16254 413 aa10.79□□□□□ -0.68
CNOT1-218ENST00000569732 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-218ENST00000569732 POTEHQ6S545 545 aa10.79□□□□□ -0.68
CNOT1-218ENST00000569732 NGLY1Q96IV0 654 aa10.79□□□□□ -0.68
CNOT1-218ENST00000569732 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
CNOT1-218ENST00000569732 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
CNOT1-218ENST00000569732 PNPLA6Q8IY17 1366 aa10.78□□□□□ -0.68
CNOT1-218ENST00000569732 LAMC1P11047 1609 aa10.78□□□□□ -0.68
CNOT1-218ENST00000569732 C8orf37Q96NL8 207 aa10.78□□□□□ -0.68
CNOT1-218ENST00000569732 ADGRL3Q9HAR2 1447 aa10.77□□□□□ -0.68
CNOT1-218ENST00000569732 PDE4AP27815 886 aa10.77□□□□□ -0.69
CNOT1-218ENST00000569732 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
CNOT1-218ENST00000569732 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
CNOT1-218ENST00000569732 ROCK1Q13464 1354 aa10.77□□□□□ -0.69
CNOT1-218ENST00000569732 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
CNOT1-218ENST00000569732 TIE1P35590 1138 aa10.76□□□□□ -0.69
CNOT1-218ENST00000569732 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
CNOT1-218ENST00000569732 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
CNOT1-218ENST00000569732 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
CNOT1-218ENST00000569732 METP08581 1390 aa10.74□□□□□ -0.69
CNOT1-218ENST00000569732 PTCH1Q13635 1447 aa10.74□□□□□ -0.69
CNOT1-218ENST00000569732 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
CNOT1-218ENST00000569732 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
CNOT1-218ENST00000569732 TRPC5Q9UL62 973 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-218ENST00000569732 NUP155O75694 1391 aa10.73□□□□□ -0.69
CNOT1-218ENST00000569732 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-218ENST00000569732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.72□□□□□ -0.69
CNOT1-218ENST00000569732 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
CNOT1-218ENST00000569732 DDX17Q92841 729 aaKnown RBP10.72□□□□□ -0.69
CNOT1-218ENST00000569732 USP21Q9UK80 565 aa10.72□□□□□ -0.69
CNOT1-218ENST00000569732 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
CNOT1-218ENST00000569732 NEXMIFQ5QGS0 1516 aa10.72□□□□□ -0.69
CNOT1-218ENST00000569732 TULP1O00294 542 aaPredicted RBP10.71□□□□□ -0.69
CNOT1-218ENST00000569732 ADAMTS2O95450 1211 aa10.71□□□□□ -0.69
CNOT1-218ENST00000569732 ZNF326Q5BKZ1 582 aaKnown RBP10.71□□□□□ -0.69
CNOT1-218ENST00000569732 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
CNOT1-218ENST00000569732 ATRNO75882 1429 aa10.7□□□□□ -0.7
CNOT1-218ENST00000569732 PRAG1Q86YV5 1406 aa10.7□□□□□ -0.7
CNOT1-218ENST00000569732 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
CNOT1-218ENST00000569732 CRISPLD2Q9H0B8 497 aa10.7□□□□□ -0.7
CNOT1-218ENST00000569732 MFSD10Q14728 455 aa10.69□□□□□ -0.7
CNOT1-218ENST00000569732 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
CNOT1-218ENST00000569732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.72e-12■□□□□ 9.4
CNOT1-218ENST00000569732 EP400Q96L91 3159 aa10.69□□□□□ -0.7
CNOT1-218ENST00000569732 DDX27Q96GQ7 796 aaKnown RBP10.68□□□□□ -0.7
CNOT1-218ENST00000569732 MYOM2P54296 1465 aa10.68□□□□□ -0.7
CNOT1-218ENST00000569732 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
CNOT1-218ENST00000569732 CLTCL1P53675 1640 aa10.67□□□□□ -0.7
CNOT1-218ENST00000569732 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
CNOT1-218ENST00000569732 KIF1BO60333 1816 aa10.66□□□□□ -0.7
CNOT1-218ENST00000569732 HAX1O00165 279 aa10.66□□□□□ -0.7
CNOT1-218ENST00000569732 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
CNOT1-218ENST00000569732 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
CNOT1-218ENST00000569732 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
CNOT1-218ENST00000569732 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
CNOT1-218ENST00000569732 CDC42BPGQ6DT37 1551 aa10.65□□□□□ -0.7
CNOT1-218ENST00000569732 NPHP3Q7Z494 1330 aa10.65□□□□□ -0.7
CNOT1-218ENST00000569732 CLCN6P51797 869 aa10.65□□□□□ -0.7
CNOT1-218ENST00000569732 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
CNOT1-218ENST00000569732 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.71
CNOT1-218ENST00000569732 PXDNQ92626 1479 aa10.64□□□□□ -0.71
CNOT1-218ENST00000569732 SEMA3EO15041 775 aa10.64□□□□□ -0.71
CNOT1-218ENST00000569732 ITGAEP38570 1179 aa10.64□□□□□ -0.71
CNOT1-218ENST00000569732 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
CNOT1-218ENST00000569732 BLMP54132 1417 aaPredicted RBP10.63□□□□□ -0.71
CNOT1-218ENST00000569732 NAIPQ13075 1403 aa10.63□□□□□ -0.71
CNOT1-218ENST00000569732 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
CNOT1-218ENST00000569732 TESPA1A2RU30 521 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-218ENST00000569732 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
CNOT1-218ENST00000569732 ESCO1Q5FWF5 840 aa10.61□□□□□ -0.71
CNOT1-218ENST00000569732 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
CNOT1-218ENST00000569732 LRP5O75197 1615 aa10.61□□□□□ -0.71
CNOT1-218ENST00000569732 GLI3P10071 1580 aa10.6□□□□□ -0.71
CNOT1-218ENST00000569732 SLIT2O94813 1529 aa10.6□□□□□ -0.71
CNOT1-218ENST00000569732 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
CNOT1-218ENST00000569732 GPHNQ9NQX3 736 aaPredicted RBP10.6□□□□□ -0.71
CNOT1-218ENST00000569732 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
CNOT1-218ENST00000569732 PPLO60437 1756 aa10.6□□□□□ -0.71
CNOT1-218ENST00000569732 EVX2Q03828 476 aa10.59□□□□□ -0.71
CNOT1-218ENST00000569732 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
CNOT1-218ENST00000569732 KIF1AQ12756 1690 aa10.59□□□□□ -0.71
CNOT1-218ENST00000569732 FOXO3O43524 673 aa10.58□□□□□ -0.72
CNOT1-218ENST00000569732 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
CNOT1-218ENST00000569732 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
CNOT1-218ENST00000569732 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
CNOT1-218ENST00000569732 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
CNOT1-218ENST00000569732 TECPR2O15040 1411 aa10.58□□□□□ -0.72
CNOT1-218ENST00000569732 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
CNOT1-218ENST00000569732 CCDC144AA2RUR9 1427 aa10.57□□□□□ -0.72
CNOT1-218ENST00000569732 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
CNOT1-218ENST00000569732 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
CNOT1-218ENST00000569732 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
CNOT1-218ENST00000569732 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
CNOT1-218ENST00000569732 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
CNOT1-218ENST00000569732 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
CNOT1-218ENST00000569732 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
CNOT1-218ENST00000569732 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms