RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
CFDP1-202ENST00000562602 ERCC6L2Q5T890 1561 aa9.89□□□□□ -0.83
CFDP1-202ENST00000562602 TRPM2O94759 1503 aa9.89□□□□□ -0.83
CFDP1-202ENST00000562602 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
CFDP1-202ENST00000562602 PANK3Q9H999 370 aa9.89□□□□□ -0.83
CFDP1-202ENST00000562602 KNSTRNQ9Y448 316 aa9.89□□□□□ -0.83
CFDP1-202ENST00000562602 SCAF11Q99590 1463 aaKnown RBP9.89□□□□□ -0.83
CFDP1-202ENST00000562602 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
CFDP1-202ENST00000562602 RNF17Q9BXT8 1623 aaKnown RBP9.87□□□□□ -0.83
CFDP1-202ENST00000562602 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
CFDP1-202ENST00000562602 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.87□□□□□ -0.83
CFDP1-202ENST00000562602 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
CFDP1-202ENST00000562602 ZCCHC11Q5TAX3 1644 aaKnown RBP9.86□□□□□ -0.83
CFDP1-202ENST00000562602 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
CFDP1-202ENST00000562602 RYDENQ9NUL5 291 aaKnown RBP9.86□□□□□ -0.83
CFDP1-202ENST00000562602 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
CFDP1-202ENST00000562602 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
CFDP1-202ENST00000562602 PBX2P40425 430 aa9.85□□□□□ -0.83
CFDP1-202ENST00000562602 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
CFDP1-202ENST00000562602 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
CFDP1-202ENST00000562602 PIK3C2GO75747 1445 aa9.84□□□□□ -0.83
CFDP1-202ENST00000562602 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
CFDP1-202ENST00000562602 KIAA1210Q9ULL0 1709 aa9.84□□□□□ -0.83
CFDP1-202ENST00000562602 SYNMO15061 1565 aa9.84□□□□□ -0.83
CFDP1-202ENST00000562602 TET3O43151 1660 aa9.83□□□□□ -0.84
CFDP1-202ENST00000562602 ZFYVE16Q7Z3T8 1539 aa9.83□□□□□ -0.84
CFDP1-202ENST00000562602 IPO9Q96P70 1041 aaKnown RBP9.83□□□□□ -0.84
CFDP1-202ENST00000562602 MYOM2P54296 1465 aa9.83□□□□□ -0.84
CFDP1-202ENST00000562602 VWDEQ8N2E2 1590 aa9.83□□□□□ -0.84
CFDP1-202ENST00000562602 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
CFDP1-202ENST00000562602 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
CFDP1-202ENST00000562602 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
CFDP1-202ENST00000562602 FANCAO15360 1455 aa9.81□□□□□ -0.84
CFDP1-202ENST00000562602 SBNO2Q9Y2G9 1366 aa9.81□□□□□ -0.84
CFDP1-202ENST00000562602 ARHGAP33O14559 1287 aa9.81□□□□□ -0.84
CFDP1-202ENST00000562602 ATP7AQ04656 1500 aa9.81□□□□□ -0.84
CFDP1-202ENST00000562602 ASXL1Q8IXJ9 1541 aa9.81□□□□□ -0.84
CFDP1-202ENST00000562602 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 CEP152O94986 1710 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
CFDP1-202ENST00000562602 TBC1D12O60347 775 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 PDE4AP27815 886 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 PPP2R1AP30153 589 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 PTGER2P43116 358 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 DMRTA1Q5VZB9 504 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 PUS7Q96PZ0 661 aaKnown RBP9.8□□□□□ -0.84
CFDP1-202ENST00000562602 LMTK2Q8IWU2 1503 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 RPGRIP1LQ68CZ1 1315 aa9.8□□□□□ -0.84
CFDP1-202ENST00000562602 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
CFDP1-202ENST00000562602 ABCA9Q8IUA7 1624 aa9.79□□□□□ -0.84
CFDP1-202ENST00000562602 PSEN2P49810 448 aa9.79□□□□□ -0.84
CFDP1-202ENST00000562602 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
CFDP1-202ENST00000562602 AFAP1Q8N556 730 aa9.79□□□□□ -0.84
CFDP1-202ENST00000562602 EXOC6Q8TAG9 804 aa9.79□□□□□ -0.84
CFDP1-202ENST00000562602 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
CFDP1-202ENST00000562602 AAMPQ13685 434 aa9.78□□□□□ -0.84
CFDP1-202ENST00000562602 DDRGK1Q96HY6 314 aa9.78□□□□□ -0.84
CFDP1-202ENST00000562602 ADGRL1O94910 1474 aa9.78□□□□□ -0.84
CFDP1-202ENST00000562602 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.84
CFDP1-202ENST00000562602 KIF3BO15066 747 aa9.77□□□□□ -0.85
CFDP1-202ENST00000562602 MFSD10Q14728 455 aa9.77□□□□□ -0.85
CFDP1-202ENST00000562602 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.85
CFDP1-202ENST00000562602 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
CFDP1-202ENST00000562602 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
CFDP1-202ENST00000562602 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 E9PSI1 815 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
CFDP1-202ENST00000562602 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 ZNF518AQ6AHZ1 1483 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 NRXN1Q9ULB1 1477 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 ZNF521Q96K83 1311 aa9.76□□□□□ -0.85
CFDP1-202ENST00000562602 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
CFDP1-202ENST00000562602 HRO43593 1189 aa9.75□□□□□ -0.85
CFDP1-202ENST00000562602 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
CFDP1-202ENST00000562602 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
CFDP1-202ENST00000562602 MAP3K4Q9Y6R4 1608 aa9.74□□□□□ -0.85
CFDP1-202ENST00000562602 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
CFDP1-202ENST00000562602 EFCAB6Q5THR3 1501 aa9.74□□□□□ -0.85
CFDP1-202ENST00000562602 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
CFDP1-202ENST00000562602 RTL5Q5HYW3 569 aaPredicted RBP9.74□□□□□ -0.85
CFDP1-202ENST00000562602 DUSP27Q5VZP5 1158 aa9.74□□□□□ -0.85
CFDP1-202ENST00000562602 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
CFDP1-202ENST00000562602 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
CFDP1-202ENST00000562602 PPM1GO15355 546 aaPredicted RBP9.73□□□□□ -0.85
CFDP1-202ENST00000562602 SLFN5Q08AF3 891 aa9.73□□□□□ -0.85
CFDP1-202ENST00000562602 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
CFDP1-202ENST00000562602 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
CFDP1-202ENST00000562602 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
CFDP1-202ENST00000562602 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
CFDP1-202ENST00000562602 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
CFDP1-202ENST00000562602 TK2O00142 265 aa9.72□□□□□ -0.85
CFDP1-202ENST00000562602 CENPJQ9HC77 1338 aaPredicted RBP9.72□□□□□ -0.85
CFDP1-202ENST00000562602 NSD2O96028 1365 aa9.72□□□□□ -0.85
CFDP1-202ENST00000562602 ASXL2Q76L83 1435 aa9.72□□□□□ -0.85
CFDP1-202ENST00000562602 MLH3Q9UHC1 1453 aa9.72□□□□□ -0.85
CFDP1-202ENST00000562602 FOSBP53539 338 aa9.71□□□□□ -0.86
CFDP1-202ENST00000562602 FAM69CQ0P6D2 419 aa9.71□□□□□ -0.86
CFDP1-202ENST00000562602 PDE3AQ14432 1141 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms