RNA–Protein interactions for RNA: ENST00000557589.1

TIMELESS-205, Transcript of timeless circadian regulator, humanhuman

TSL 2

Gene TIMELESS, Length 2,784 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-205ENST00000557589 MTHFSP49914 203 aa13.02□□□□□ -0.33
TIMELESS-205ENST00000557589 IDI1Q13907 227 aa13.02□□□□□ -0.33
TIMELESS-205ENST00000557589 C8orf34Q49A92 452 aa13.02□□□□□ -0.33
TIMELESS-205ENST00000557589 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
TIMELESS-205ENST00000557589 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
TIMELESS-205ENST00000557589 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
TIMELESS-205ENST00000557589 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
TIMELESS-205ENST00000557589 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
TIMELESS-205ENST00000557589 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
TIMELESS-205ENST00000557589 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
TIMELESS-205ENST00000557589 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
TIMELESS-205ENST00000557589 BCAR3O75815 825 aa12.99□□□□□ -0.33
TIMELESS-205ENST00000557589 DHX37Q8IY37 1157 aaKnown RBP12.98□□□□□ -0.33
TIMELESS-205ENST00000557589 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
TIMELESS-205ENST00000557589 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
TIMELESS-205ENST00000557589 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
TIMELESS-205ENST00000557589 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-205ENST00000557589 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
TIMELESS-205ENST00000557589 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
TIMELESS-205ENST00000557589 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
TIMELESS-205ENST00000557589 SIRT1Q96EB6 747 aa12.96□□□□□ -0.34
TIMELESS-205ENST00000557589 PLEKHF1Q96S99 279 aa12.96□□□□□ -0.34
TIMELESS-205ENST00000557589 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
TIMELESS-205ENST00000557589 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
TIMELESS-205ENST00000557589 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
TIMELESS-205ENST00000557589 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 TECPR2O15040 1411 aa12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
TIMELESS-205ENST00000557589 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 MVPQ14764 893 aaKnown RBP12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 MON2Q7Z3U7 1717 aa12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 FYB1O15117 783 aa12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 FCHSD2O94868 740 aa12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 IGHDP01880 384 aa12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
TIMELESS-205ENST00000557589 CPS1P31327 1500 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 POGKQ9P215 609 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
TIMELESS-205ENST00000557589 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 AKAP12Q02952 1782 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 NEFMP07197 916 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
TIMELESS-205ENST00000557589 DZIP1LQ8IYY4 767 aaKnown RBP12.89□□□□□ -0.35
TIMELESS-205ENST00000557589 LRRC7Q96NW7 1537 aa12.89□□□□□ -0.35
TIMELESS-205ENST00000557589 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
TIMELESS-205ENST00000557589 BECN1Q14457 450 aa12.88□□□□□ -0.35
TIMELESS-205ENST00000557589 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
TIMELESS-205ENST00000557589 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
TIMELESS-205ENST00000557589 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
TIMELESS-205ENST00000557589 RGS3P49796 1198 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 MLECQ14165 292 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
TIMELESS-205ENST00000557589 USP19O94966 1318 aa12.86□□□□□ -0.35
TIMELESS-205ENST00000557589 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
TIMELESS-205ENST00000557589 C3P01024 1663 aa12.86□□□□□ -0.35
TIMELESS-205ENST00000557589 FTSJ3Q8IY81 847 aaKnown RBP12.86□□□□□ -0.35
TIMELESS-205ENST00000557589 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 ARHGAP45Q92619 1136 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 RLBP1P12271 317 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
TIMELESS-205ENST00000557589 STK26Q9P289 416 aa12.84□□□□□ -0.35
TIMELESS-205ENST00000557589 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
TIMELESS-205ENST00000557589 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
TIMELESS-205ENST00000557589 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
TIMELESS-205ENST00000557589 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 U2SURPO15042 1029 aaKnown RBP12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms