RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RTL5Q5HYW3 569 aaPredicted RBP5.5□□□□□ -1.53
RDH11-204ENST00000553578 BCL2L12Q9HB09 334 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 PRG4Q92954 1404 aaPredicted RBP5.5□□□□□ -1.53
RDH11-204ENST00000553578 RAB3GAP2Q9H2M9 1393 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 ARHGEF12Q9NZN5 1544 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 LMTK2Q8IWU2 1503 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 RSPH4AQ5TD94 716 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 ANKRD13DQ6ZTN6 518 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 ADAM33Q9BZ11 813 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 NCOA1Q15788 1441 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 PCDH10Q9P2E7 1040 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 AXIN2Q9Y2T1 843 aa5.49□□□□□ -1.53
RDH11-204ENST00000553578 TESPA1A2RU30 521 aaPredicted RBP5.48□□□□□ -1.53
RDH11-204ENST00000553578 NAP1L5Q96NT1 182 aaPredicted RBP5.48□□□□□ -1.53
RDH11-204ENST00000553578 EN1Q05925 392 aaPredicted RBP5.48□□□□□ -1.53
RDH11-204ENST00000553578 PZPP20742 1482 aa5.48□□□□□ -1.53
RDH11-204ENST00000553578 C6orf132Q5T0Z8 1188 aa5.48□□□□□ -1.53
RDH11-204ENST00000553578 PRDM15P57071 1507 aaPredicted RBP5.47□□□□□ -1.53
RDH11-204ENST00000553578 KIAA1210Q9ULL0 1709 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 BRD2P25440 801 aaKnown RBP5.47□□□□□ -1.53
RDH11-204ENST00000553578 MROH1Q8NDA8 1641 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 PLCH2O75038 1416 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 UHRF1BP1Q6BDS2 1440 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 IFT172Q9UG01 1749 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 CLUAP1Q96AJ1 413 aa5.47□□□□□ -1.53
RDH11-204ENST00000553578 ERBINQ96RT1 1412 aa5.46□□□□□ -1.53
RDH11-204ENST00000553578 MTUS2Q5JR59 1369 aa5.46□□□□□ -1.53
RDH11-204ENST00000553578 PSEN2P49810 448 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 CERKQ8TCT0 537 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 ZFYVE16Q7Z3T8 1539 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 RPRD2Q5VT52 1461 aaKnown RBP5.46□□□□□ -1.54
RDH11-204ENST00000553578 DUOX2Q9NRD8 1548 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 POTEB3A0JP26 581 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 PPP1R3GB7ZBB8 358 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 IGSF3O75054 1194 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 OSBPP22059 807 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 POTEBQ6S5H4 581 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 ZMYM4Q5VZL5 1548 aa5.46□□□□□ -1.54
RDH11-204ENST00000553578 MFAP1P55081 439 aaKnown RBP5.45□□□□□ -1.54
RDH11-204ENST00000553578 CCDC141Q6ZP82 1450 aa5.45□□□□□ -1.54
RDH11-204ENST00000553578 ZC3H13Q5T200 1668 aaKnown RBP5.45□□□□□ -1.54
RDH11-204ENST00000553578 LSM11P83369 360 aaKnown RBP eCLIP5.45□□□□□ -1.54
RDH11-204ENST00000553578 CEP152O94986 1710 aa5.45□□□□□ -1.54
RDH11-204ENST00000553578 GPIHBP1Q8IV16 184 aa5.45□□□□□ -1.54
RDH11-204ENST00000553578 PPRC1Q5VV67 1664 aaKnown RBP5.44□□□□□ -1.54
RDH11-204ENST00000553578 GOLGA8CPA6NN73 597 aa5.44□□□□□ -1.54
RDH11-204ENST00000553578 TSR1Q2NL82 804 aaKnown RBP5.44□□□□□ -1.54
RDH11-204ENST00000553578 E9PCH4 1651 aa5.44□□□□□ -1.54
RDH11-204ENST00000553578 TET3O43151 1660 aa5.44□□□□□ -1.54
RDH11-204ENST00000553578 RBM26Q5T8P6 1007 aaKnown RBP5.44□□□□□ -1.54
RDH11-204ENST00000553578 RICTORQ6R327 1708 aa5.44□□□□□ -1.54
RDH11-204ENST00000553578 FCHSD2O94868 740 aa5.44□□□□□ -1.54
RDH11-204ENST00000553578 ZNF326Q5BKZ1 582 aaKnown RBP5.43□□□□□ -1.54
RDH11-204ENST00000553578 ZC3H15Q8WU90 426 aaKnown RBP5.43□□□□□ -1.54
RDH11-204ENST00000553578 NBPF3Q9H094 633 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 IRX6P78412 446 aaPredicted RBP5.43□□□□□ -1.54
RDH11-204ENST00000553578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.43□□□□□ -1.54
RDH11-204ENST00000553578 PACS2Q86VP3 889 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 KIDINS220Q9ULH0 1771 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 ANKRD30BQ9BXX2 1392 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 NECTIN2Q92692 538 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 PIK3C2BO00750 1634 aa5.43□□□□□ -1.54
RDH11-204ENST00000553578 KDM5AP29375 1690 aaKnown RBP5.42□□□□□ -1.54
RDH11-204ENST00000553578 SPATA31E1Q6ZUB1 1445 aa5.42□□□□□ -1.54
RDH11-204ENST00000553578 ZNF518AQ6AHZ1 1483 aa5.42□□□□□ -1.54
RDH11-204ENST00000553578 CHMP7Q8WUX9 453 aaPredicted RBP5.42□□□□□ -1.54
RDH11-204ENST00000553578 PTPRTO14522 1441 aa5.42□□□□□ -1.54
RDH11-204ENST00000553578 TK2O00142 265 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 DMRTA1Q5VZB9 504 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 NEO1Q92859 1461 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 SPHKAPQ2M3C7 1700 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 TRPM1Q7Z4N2 1603 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 MYO3AQ8NEV4 1616 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 MLH3Q9UHC1 1453 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 ADGRD1Q6QNK2 874 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 CDHR5Q9HBB8 845 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 FRMPD1Q5SYB0 1578 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 TRPM2O94759 1503 aa5.41□□□□□ -1.54
RDH11-204ENST00000553578 COL9A1P20849 921 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 PRSS12P56730 875 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 SYCP2Q9BX26 1530 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 C9orf84Q5VXU9 1444 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 HIC1Q14526 733 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 MRPL50Q8N5N7 158 aaKnown RBP5.4□□□□□ -1.54
RDH11-204ENST00000553578 CDCA7LQ96GN5 454 aa5.4□□□□□ -1.54
RDH11-204ENST00000553578 PUS7Q96PZ0 661 aaKnown RBP5.4□□□□□ -1.54
RDH11-204ENST00000553578 NAP1L2Q9ULW6 460 aaPredicted RBP5.4□□□□□ -1.54
RDH11-204ENST00000553578 NRXN1Q9ULB1 1477 aa5.4□□□□□ -1.55
RDH11-204ENST00000553578 HDGFP51858 240 aaKnown RBP5.4□□□□□ -1.55
RDH11-204ENST00000553578 PROX2Q3B8N5 592 aa5.4□□□□□ -1.55
RDH11-204ENST00000553578 ZBED2Q9BTP6 218 aa5.4□□□□□ -1.55
RDH11-204ENST00000553578 NBPF26B4DH59 902 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 CHMP4BQ9H444 224 aaKnown RBP5.39□□□□□ -1.55
RDH11-204ENST00000553578 VPS9D1Q9Y2B5 631 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 TRIM6-TRIM34B2RNG4 842 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 PRIM1P49642 420 aaKnown RBP5.39□□□□□ -1.55
RDH11-204ENST00000553578 POTEEQ6S8J3 1075 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 SLC4A5Q9BY07 1137 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms