RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 ROBO1Q9Y6N7 1651 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 APLP1P51693 650 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 EN1Q05925 392 aaPredicted RBP4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 DNAJC5GQ8N7S2 189 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 SPON1Q9HCB6 807 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 SEPT9Q9UHD8 586 aaPredicted RBP4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 SYNMO15061 1565 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 HECW1Q76N89 1606 aa4.13□□□□□ -1.75
TRAV1-1-201ENST00000542354 RTEL1-TNFRSF6BF6WH68 1400 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 NPHP4O75161 1426 aaPredicted RBP4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 PHLPP1O60346 1717 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 DPYSL4O14531 572 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 GFRA3O60609 400 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 SLF2Q8IX21 1173 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 UTRNP46939 3433 aa4.12□□□□□ -1.75
TRAV1-1-201ENST00000542354 LRRC9Q6ZRR7 1453 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 AGLP35573 1532 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 DISP1Q96F81 1524 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 CHD4Q14839 1912 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 ZNF142P52746 1687 aaPredicted RBP4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 MLLT1Q03111 559 aaPredicted RBP4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 PDIA6Q15084 440 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 TRAF7Q6Q0C0 670 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 DDX12PQ92771 950 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 USP21Q9UK80 565 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 MED14O60244 1454 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 SCAF11Q99590 1463 aaKnown RBP4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 KDM5DQ9BY66 1539 aa4.11□□□□□ -1.75
TRAV1-1-201ENST00000542354 NEURL4Q96JN8 1562 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 ARID3CA6NKF2 412 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 RNF40O75150 1001 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 PRSS12P56730 875 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 BBXQ8WY36 941 aaPredicted RBP4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 CDCA7LQ96GN5 454 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 TMUB1Q9BVT8 246 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 SCAPERQ9BY12 1400 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 A2ML1A8K2U0 1454 aa4.1□□□□□ -1.75
TRAV1-1-201ENST00000542354 POLR1AO95602 1720 aaPredicted RBP4.09□□□□□ -1.75
TRAV1-1-201ENST00000542354 KCNQ2O43526 872 aa4.09□□□□□ -1.75
TRAV1-1-201ENST00000542354 PRKD2Q9BZL6 878 aa4.09□□□□□ -1.75
TRAV1-1-201ENST00000542354 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.09□□□□□ -1.75
TRAV1-1-201ENST00000542354 KDM5CP41229 1560 aa4.09□□□□□ -1.75
TRAV1-1-201ENST00000542354 MYO3AQ8NEV4 1616 aa4.09□□□□□ -1.76
TRAV1-1-201ENST00000542354 STRCP1A6NGW2 1772 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 ATP10BO94823 1461 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 DNMT1P26358 1616 aaKnown RBP4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 E2F4Q16254 413 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 TNS2Q63HR2 1409 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 SAMD7Q7Z3H4 446 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 PROSER2Q86WR7 435 aaPredicted RBP4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 JMYQ8N9B5 988 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 TATDN2Q93075 761 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 MTRQ99707 1265 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 CFAP74Q9C0B2 1584 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 PNMA3Q9UL41 463 aa4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 ARIH1Q9Y4X5 557 aaPredicted RBP4.08□□□□□ -1.76
TRAV1-1-201ENST00000542354 COL16A1Q07092 1604 aaPredicted RBP4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 IQGAP2Q13576 1575 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 RALGAPBQ86X10 1494 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 ADAMTS2O95450 1211 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 TJAP1Q5JTD0 557 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 RSPH4AQ5TD94 716 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 SPRYD3Q8NCJ5 442 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 TSKSQ9UJT2 592 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 PDZRN3Q9UPQ7 1066 aa4.07□□□□□ -1.76
TRAV1-1-201ENST00000542354 SHPRHQ149N8 1683 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 CAMTA1Q9Y6Y1 1673 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 MSH6P52701 1360 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 PPP1R18Q6NYC8 613 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 FNBP4Q8N3X1 1017 aaPredicted RBP4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 KLRG1Q96E93 195 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 GJD4Q96KN9 370 aaPredicted RBP4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 GPBP1L1Q9HC44 474 aaPredicted RBP4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 MROH2AA6NES4 1674 aa4.06□□□□□ -1.76
TRAV1-1-201ENST00000542354 IGF1RP08069 1367 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 GRXCR2A6NFK2 248 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 DLL1O00548 723 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 NBPF8Q3BBV2 869 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 KMT5BQ4FZB7 885 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 PKDCCQ504Y2 493 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 NBPF14Q5TI25 921 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 ZNF787Q6DD87 383 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 AFAP1Q8N556 730 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 LRRC59Q96AG4 307 aaKnown RBP4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 DEPDC5O75140 1603 aa4.05□□□□□ -1.76
TRAV1-1-201ENST00000542354 IQGAP1P46940 1657 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 PITPNM2Q9BZ72 1349 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 PLEKHD1A6NEE1 506 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 GPR162Q16538 588 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 TSR1Q2NL82 804 aaKnown RBP4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 EFCAB2Q5VUJ9 269 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 NUDT18Q6ZVK8 323 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 MPNDQ8N594 471 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 SYT17Q9BSW7 474 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 PCDHB3Q9Y5E6 796 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 REREQ9P2R6 1566 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms