RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DHX37Q8IY37 1157 aaKnown RBP4.85□□□□□ -1.63
PTPN22-211ENST00000538253 CDCA7Q9BWT1 371 aaPredicted RBP4.85□□□□□ -1.63
PTPN22-211ENST00000538253 CHMP4AQ9BY43 222 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 KIF24Q5T7B8 1368 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 TRPM1Q7Z4N2 1603 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 HOXD11P31277 338 aaPredicted RBP4.84□□□□□ -1.63
PTPN22-211ENST00000538253 FGD1P98174 961 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 TMC1Q8TDI8 760 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 NGLY1Q96IV0 654 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 CFAP53Q96M91 514 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 ASXL1Q8IXJ9 1541 aa4.84□□□□□ -1.63
PTPN22-211ENST00000538253 COG3Q96JB2 828 aa4.84□□□□□ -1.64
PTPN22-211ENST00000538253 SOS2Q07890 1332 aaPredicted RBP4.84□□□□□ -1.64
PTPN22-211ENST00000538253 AHDC1Q5TGY3 1603 aaPredicted RBP4.84□□□□□ -1.64
PTPN22-211ENST00000538253 NRXN3Q9Y4C0 1643 aa4.84□□□□□ -1.64
PTPN22-211ENST00000538253 ITSN1Q15811 1721 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 BRINP3Q76B58 766 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 ANKRD36BQ8N2N9 1353 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 EDC4Q6P2E9 1401 aaKnown RBP4.83□□□□□ -1.64
PTPN22-211ENST00000538253 ST20-MTHFSA0A0A6YYL1 179 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 WAPLQ7Z5K2 1190 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 POLR3AO14802 1390 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-211ENST00000538253 PLEKHG2Q9H7P9 1386 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 TNS3Q68CZ2 1445 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 NBPF1Q3BBV0 1214 aa4.83□□□□□ -1.64
PTPN22-211ENST00000538253 PPIP5K1Q6PFW1 1433 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 SAFB2Q14151 953 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN22-211ENST00000538253 NBPF8Q3BBV2 869 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 SMG6Q86US8 1419 aaKnown RBP4.82□□□□□ -1.64
PTPN22-211ENST00000538253 MYO5BQ9ULV0 1848 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 NPC1L1Q9UHC9 1359 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 SPATA31A3Q5VYP0 1347 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 PAK3O75914 559 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-211ENST00000538253 HSPA5P11021 654 aaKnown RBP4.82□□□□□ -1.64
PTPN22-211ENST00000538253 TPRNQ4KMQ1 711 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 TAF7LQ5H9L4 462 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 LMOD2Q6P5Q4 547 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 NUDCQ9Y266 331 aa4.82□□□□□ -1.64
PTPN22-211ENST00000538253 ABCC6O95255 1503 aa4.81□□□□□ -1.64
PTPN22-211ENST00000538253 USP31Q70CQ4 1352 aa4.81□□□□□ -1.64
PTPN22-211ENST00000538253 ACEP12821 1306 aa4.81□□□□□ -1.64
PTPN22-211ENST00000538253 ABTB2Q8N961 1025 aa4.81□□□□□ -1.64
PTPN22-211ENST00000538253 RTL1A6NKG5 1358 aa4.81□□□□□ -1.64
PTPN22-211ENST00000538253 POLR3GLQ9BT43 218 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 FMN2Q9NZ56 1722 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 NLRP6P59044 892 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 RALBP1Q15311 655 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 SAMD1Q6SPF0 538 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-211ENST00000538253 CABP1Q9NZU7 370 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 TRPC5Q9UL62 973 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-211ENST00000538253 SETD1AO15047 1707 aaKnown RBP4.8□□□□□ -1.64
PTPN22-211ENST00000538253 TTC21BQ7Z4L5 1316 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-211ENST00000538253 FOXO3O43524 673 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 EVA1CP58658 441 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 CABP2Q9NPB3 220 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 PRDM11Q9NQV5 511 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 THRAP3Q9Y2W1 955 aaKnown RBP4.8□□□□□ -1.64
PTPN22-211ENST00000538253 USP6P35125 1406 aa4.8□□□□□ -1.64
PTPN22-211ENST00000538253 HIRIP3Q9BW71 556 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-211ENST00000538253 ARHGEF28Q8N1W1 1705 aaKnown RBP4.79□□□□□ -1.64
PTPN22-211ENST00000538253 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-211ENST00000538253 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 PNPLA6Q8IY17 1366 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 CCDC7Q96M83 1385 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 PLEKHH1Q9ULM0 1364 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 HSPA1LP34931 641 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 NGEFQ8N5V2 710 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 TESK2Q96S53 571 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 QRICH2Q9H0J4 1663 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 CPDO75976 1380 aa4.79□□□□□ -1.64
PTPN22-211ENST00000538253 ZNF316A6NFI3 1004 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-211ENST00000538253 AMPHP49418 695 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 BLMP54132 1417 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-211ENST00000538253 CSB-PGBD3P0DP91 1061 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 MED1Q15648 1581 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-211ENST00000538253 USP19O94966 1318 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 CPSF1Q10570 1443 aaKnown RBP4.78□□□□□ -1.64
PTPN22-211ENST00000538253 HSP90AB1P08238 724 aaKnown RBP4.78□□□□□ -1.64
PTPN22-211ENST00000538253 PPP4R3CPQ6ZMV5 832 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 ORAI2Q96SN7 254 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
PTPN22-211ENST00000538253 ANP32CO43423 234 aa4.77□□□□□ -1.65
PTPN22-211ENST00000538253 RBM6P78332 1123 aaKnown RBP4.77□□□□□ -1.65
PTPN22-211ENST00000538253 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
PTPN22-211ENST00000538253 SF3B2Q13435 895 aaKnown RBP4.77□□□□□ -1.65
PTPN22-211ENST00000538253 CCDC125Q86Z20 511 aa4.77□□□□□ -1.65
PTPN22-211ENST00000538253 NHSL1Q5SYE7 1610 aa4.77□□□□□ -1.65
PTPN22-211ENST00000538253 ROBO1Q9Y6N7 1651 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 NALCNQ8IZF0 1738 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 USP32Q8NFA0 1604 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 NUTM2FA1L443 756 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 CCDC9Q9Y3X0 531 aaKnown RBP4.76□□□□□ -1.65
PTPN22-211ENST00000538253 CDK12Q9NYV4 1490 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-211ENST00000538253 RXRBP28702 533 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 AAMPQ13685 434 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 LHX8Q68G74 356 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 UNC5CLQ8IV45 518 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 PXDNQ92626 1479 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms