RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 CFAP43Q8NDM7 1665 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 LCE2BO14633 110 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 SPTLC1O15269 473 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 CSPP1Q1MSJ5 1256 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 TUSC1Q2TAM9 212 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-203ENST00000537024 RDH13Q8NBN7 331 aa7.04□□□□□ -1.28
SNHG1-203ENST00000537024 KDM5BQ9UGL1 1544 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 ZCCHC11Q5TAX3 1644 aaKnown RBP7.03□□□□□ -1.28
SNHG1-203ENST00000537024 MOXD2PA6NHM9 499 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 C3orf80F5H4A9 247 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 SMAPO00193 183 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 RSPH4AQ5TD94 716 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 LAPTM4BQ86VI4 370 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 SNRKQ9NRH2 765 aa7.03□□□□□ -1.28
SNHG1-203ENST00000537024 ZNF777Q9ULD5 760 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-203ENST00000537024 PTPRGP23470 1445 aa7.02□□□□□ -1.29
SNHG1-203ENST00000537024 YEATS2Q9ULM3 1422 aa7.02□□□□□ -1.29
SNHG1-203ENST00000537024 FNBP4Q8N3X1 1017 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-203ENST00000537024 WBP1LQ9NX94 342 aa7.02□□□□□ -1.29
SNHG1-203ENST00000537024 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
SNHG1-203ENST00000537024 PREX1Q8TCU6 1659 aa7.02□□□□□ -1.29
SNHG1-203ENST00000537024 ARAP3Q8WWN8 1544 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 NDUFV2P19404 249 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 GJA5P36382 358 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 KCNC4Q03721 635 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-203ENST00000537024 NYAP1Q6ZVC0 841 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 PRM3Q9NNZ6 103 aa7.01□□□□□ -1.29
SNHG1-203ENST00000537024 WDR7Q9Y4E6 1490 aa7□□□□□ -1.29
SNHG1-203ENST00000537024 NUTM2BA6NNL0 878 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 NUTM2EB1AL46 878 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 KDM4AO75164 1064 aa7□□□□□ -1.29
SNHG1-203ENST00000537024 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 NUTM2AQ8IVF1 878 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 WWC1Q8IX03 1113 aa7□□□□□ -1.29
SNHG1-203ENST00000537024 CCDC97Q96F63 343 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 ZFRQ96KR1 1074 aaKnown RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 KIAA1468Q9P260 1216 aa7□□□□□ -1.29
SNHG1-203ENST00000537024 ZNF330Q9Y3S2 320 aaPredicted RBP7□□□□□ -1.29
SNHG1-203ENST00000537024 AP1G2O75843 785 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 USP46P62068 366 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 QPCTQ16769 361 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 SERPINA10Q9UK55 444 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 PTPRTO14522 1441 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 TTC37Q6PGP7 1564 aa6.99□□□□□ -1.29
SNHG1-203ENST00000537024 ARHGEF40Q8TER5 1519 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 LILRB3O75022 631 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 HDGFP51858 240 aaKnown RBP6.98□□□□□ -1.29
SNHG1-203ENST00000537024 LAPTM4AQ15012 233 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 MTMR14Q8NCE2 650 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 CD109Q6YHK3 1445 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 UACAQ9BZF9 1416 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 FRMPD1Q5SYB0 1578 aa6.98□□□□□ -1.29
SNHG1-203ENST00000537024 TNIKQ9UKE5 1360 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 GCGRP47871 477 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 WRNQ14191 1432 aaPredicted RBP eCLIP6.97□□□□□ -1.29
SNHG1-203ENST00000537024 PRPF38BQ5VTL8 546 aaKnown RBP6.97□□□□□ -1.29
SNHG1-203ENST00000537024 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 PODXL2Q9NZ53 605 aa6.97□□□□□ -1.29
SNHG1-203ENST00000537024 FER1L4A9Z1Z3 1794 aa6.96□□□□□ -1.3
SNHG1-203ENST00000537024 HOXA2O43364 376 aa6.96□□□□□ -1.3
SNHG1-203ENST00000537024 FDX1P10109 184 aa6.96□□□□□ -1.3
SNHG1-203ENST00000537024 RTL5Q5HYW3 569 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-203ENST00000537024 SWT1Q5T5J6 900 aaKnown RBP6.96□□□□□ -1.3
SNHG1-203ENST00000537024 TRAF7Q6Q0C0 670 aa6.96□□□□□ -1.3
SNHG1-203ENST00000537024 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
SNHG1-203ENST00000537024 SEPT9Q9UHD8 586 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-203ENST00000537024 GFRA3O60609 400 aa6.95□□□□□ -1.3
SNHG1-203ENST00000537024 USP17L8P0C7I0 530 aa6.95□□□□□ -1.3
SNHG1-203ENST00000537024 PDIA4P13667 645 aaKnown RBP6.95□□□□□ -1.3
SNHG1-203ENST00000537024 ABL2P42684 1182 aa6.95□□□□□ -1.3
SNHG1-203ENST00000537024 SIGLEC1Q9BZZ2 1709 aa6.94□□□□□ -1.3
SNHG1-203ENST00000537024 HRCP23327 699 aa6.94□□□□□ -1.3
SNHG1-203ENST00000537024 TSR3Q9UJK0 312 aaKnown RBP6.94□□□□□ -1.3
SNHG1-203ENST00000537024 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
SNHG1-203ENST00000537024 SLC10A3P09131 477 aa6.93□□□□□ -1.3
SNHG1-203ENST00000537024 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-203ENST00000537024 FAM98CQ17RN3 349 aaKnown RBP6.93□□□□□ -1.3
SNHG1-203ENST00000537024 TBC1D2BQ9UPU7 963 aa6.93□□□□□ -1.3
SNHG1-203ENST00000537024 ARID4BQ4LE39 1312 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-203ENST00000537024 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
SNHG1-203ENST00000537024 GRIPAP1Q4V328 841 aa6.92□□□□□ -1.3
SNHG1-203ENST00000537024 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
SNHG1-203ENST00000537024 HELBQ8NG08 1087 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-203ENST00000537024 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-203ENST00000537024 HPS5Q9UPZ3 1129 aa6.92□□□□□ -1.3
SNHG1-203ENST00000537024 TTBK1Q5TCY1 1321 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-203ENST00000537024 CARMIL2Q6F5E8 1435 aa6.92□□□□□ -1.3
SNHG1-203ENST00000537024 GUCA2AQ02747 115 aa6.91□□□□□ -1.3
SNHG1-203ENST00000537024 MTMR2Q13614 643 aa6.91□□□□□ -1.3
SNHG1-203ENST00000537024 TSC1Q92574 1164 aa6.91□□□□□ -1.3
SNHG1-203ENST00000537024 CALR3Q96L12 384 aaKnown RBP6.91□□□□□ -1.3
SNHG1-203ENST00000537024 NDUFB9Q9Y6M9 179 aa6.91□□□□□ -1.3
SNHG1-203ENST00000537024 FANCAO15360 1455 aa6.91□□□□□ -1.3
SNHG1-203ENST00000537024 RNF40O75150 1001 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms