RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 COL17A1Q9UMD9 1497 aaPredicted RBP10.26□□□□□ -0.77
SOX6-216ENST00000533658 THAP11Q96EK4 314 aa10.25□□□□□ -0.77
SOX6-216ENST00000533658 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
SOX6-216ENST00000533658 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
SOX6-216ENST00000533658 J3QL48 77 aa10.24□□□□□ -0.77
SOX6-216ENST00000533658 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
SOX6-216ENST00000533658 FAM160A2Q8N612 972 aaPredicted RBP10.24□□□□□ -0.77
SOX6-216ENST00000533658 PRDM9Q9NQV7 894 aa10.24□□□□□ -0.77
SOX6-216ENST00000533658 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
SOX6-216ENST00000533658 IQGAP2Q13576 1575 aa10.23□□□□□ -0.77
SOX6-216ENST00000533658 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
SOX6-216ENST00000533658 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
SOX6-216ENST00000533658 MORN1Q5T089 497 aa10.23□□□□□ -0.77
SOX6-216ENST00000533658 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
SOX6-216ENST00000533658 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
SOX6-216ENST00000533658 HPS1Q92902 700 aa10.22□□□□□ -0.77
SOX6-216ENST00000533658 IRF7Q92985 503 aa10.22□□□□□ -0.77
SOX6-216ENST00000533658 UACAQ9BZF9 1416 aa10.22□□□□□ -0.77
SOX6-216ENST00000533658 DISP1Q96F81 1524 aa10.22□□□□□ -0.77
SOX6-216ENST00000533658 FMNL1O95466 1100 aaPredicted RBP10.21□□□□□ -0.77
SOX6-216ENST00000533658 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
SOX6-216ENST00000533658 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
SOX6-216ENST00000533658 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.78
SOX6-216ENST00000533658 MAP3K4Q9Y6R4 1608 aa10.21□□□□□ -0.78
SOX6-216ENST00000533658 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
SOX6-216ENST00000533658 TEX14Q8IWB6 1497 aa10.19□□□□□ -0.78
SOX6-216ENST00000533658 TRIM32Q13049 653 aa10.19□□□□□ -0.78
SOX6-216ENST00000533658 MLLT3P42568 568 aaPredicted RBP10.18□□□□□ -0.78
SOX6-216ENST00000533658 GSK3AP49840 483 aa10.18□□□□□ -0.78
SOX6-216ENST00000533658 VEGFBP49765 207 aa10.17□□□□□ -0.78
SOX6-216ENST00000533658 FUT2Q10981 343 aa10.17□□□□□ -0.78
SOX6-216ENST00000533658 XP32Q5T750 250 aa10.17□□□□□ -0.78
SOX6-216ENST00000533658 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
SOX6-216ENST00000533658 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
SOX6-216ENST00000533658 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
SOX6-216ENST00000533658 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
SOX6-216ENST00000533658 KRTAP4-8Q9BYQ9 185 aa10.16□□□□□ -0.78
SOX6-216ENST00000533658 SLC27A5Q9Y2P5 690 aa10.16□□□□□ -0.78
SOX6-216ENST00000533658 WDR7Q9Y4E6 1490 aa10.16□□□□□ -0.78
SOX6-216ENST00000533658 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
SOX6-216ENST00000533658 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
SOX6-216ENST00000533658 H3BM21 787 aa10.15□□□□□ -0.78
SOX6-216ENST00000533658 MSS51Q4VC12 460 aa10.15□□□□□ -0.78
SOX6-216ENST00000533658 SALL2Q9Y467 1007 aaPredicted RBP10.15□□□□□ -0.78
SOX6-216ENST00000533658 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
SOX6-216ENST00000533658 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
SOX6-216ENST00000533658 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
SOX6-216ENST00000533658 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
SOX6-216ENST00000533658 OATP04181 439 aa10.13□□□□□ -0.79
SOX6-216ENST00000533658 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
SOX6-216ENST00000533658 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
SOX6-216ENST00000533658 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
SOX6-216ENST00000533658 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
SOX6-216ENST00000533658 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
SOX6-216ENST00000533658 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
SOX6-216ENST00000533658 RDH13Q8NBN7 331 aa10.11□□□□□ -0.79
SOX6-216ENST00000533658 MAGI3Q5TCQ9 1506 aa10.11□□□□□ -0.79
SOX6-216ENST00000533658 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
SOX6-216ENST00000533658 FECHP22830 423 aa10.09□□□□□ -0.79
SOX6-216ENST00000533658 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
SOX6-216ENST00000533658 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
SOX6-216ENST00000533658 BMP1P13497 986 aa10.08□□□□□ -0.8
SOX6-216ENST00000533658 RNF19BQ6ZMZ0 732 aa10.08□□□□□ -0.8
SOX6-216ENST00000533658 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
SOX6-216ENST00000533658 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
SOX6-216ENST00000533658 KIF21BO75037 1637 aa10.07□□□□□ -0.8
SOX6-216ENST00000533658 FCHSD2O94868 740 aa10.07□□□□□ -0.8
SOX6-216ENST00000533658 GDF11O95390 407 aa10.07□□□□□ -0.8
SOX6-216ENST00000533658 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
SOX6-216ENST00000533658 ABCA8O94911 1581 aa10.06□□□□□ -0.8
SOX6-216ENST00000533658 MMP16P51512 607 aa10.06□□□□□ -0.8
SOX6-216ENST00000533658 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
SOX6-216ENST00000533658 PRXQ9BXM0 1461 aa10.05□□□□□ -0.8
SOX6-216ENST00000533658 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
SOX6-216ENST00000533658 RASSF7Q02833 373 aa10.04□□□□□ -0.8
SOX6-216ENST00000533658 FBXO41Q8TF61 875 aa10.04□□□□□ -0.8
SOX6-216ENST00000533658 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
SOX6-216ENST00000533658 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
SOX6-216ENST00000533658 ARAP3Q8WWN8 1544 aa10.03□□□□□ -0.8
SOX6-216ENST00000533658 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
SOX6-216ENST00000533658 GCGRP47871 477 aa10.03□□□□□ -0.8
SOX6-216ENST00000533658 WNT7BP56706 349 aa10.03□□□□□ -0.8
SOX6-216ENST00000533658 SKOR1P84550 965 aa10.03□□□□□ -0.8
SOX6-216ENST00000533658 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.8
SOX6-216ENST00000533658 PTPRMP28827 1452 aa10.02□□□□□ -0.81
SOX6-216ENST00000533658 CAPN5O15484 640 aaPredicted RBP10□□□□□ -0.81
SOX6-216ENST00000533658 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
SOX6-216ENST00000533658 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.99□□□□□ -0.81
SOX6-216ENST00000533658 DXOO77932 396 aaKnown RBP9.99□□□□□ -0.81
SOX6-216ENST00000533658 PCF11O94913 1555 aaKnown RBP9.98□□□□□ -0.81
SOX6-216ENST00000533658 ABCA9Q8IUA7 1624 aa9.98□□□□□ -0.81
SOX6-216ENST00000533658 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
SOX6-216ENST00000533658 Q3C1V9 767 aa9.98□□□□□ -0.81
SOX6-216ENST00000533658 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
SOX6-216ENST00000533658 FRMPD1Q5SYB0 1578 aa9.97□□□□□ -0.81
SOX6-216ENST00000533658 KRTAP9-2Q9BYQ4 174 aa9.97□□□□□ -0.81
SOX6-216ENST00000533658 ATP10BO94823 1461 aa9.97□□□□□ -0.81
SOX6-216ENST00000533658 RAPGEF3O95398 923 aa9.96□□□□□ -0.82
SOX6-216ENST00000533658 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
SOX6-216ENST00000533658 SULF1Q8IWU6 871 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms