RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 AEBP2Q6ZN18 517 aaPredicted RBP30.18■■■□□ 2.42
SOX6-216ENST00000533658 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
SOX6-216ENST00000533658 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
SOX6-216ENST00000533658 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
SOX6-216ENST00000533658 POTEDQ86YR6 584 aa24.56■■□□□ 1.52
SOX6-216ENST00000533658 FOXD1Q16676 465 aa24.28■■□□□ 1.48
SOX6-216ENST00000533658 MSH5O43196 834 aa23.18■■□□□ 1.3
SOX6-216ENST00000533658 PIAS4Q8N2W9 510 aaPredicted RBP22.42■■□□□ 1.18
SOX6-216ENST00000533658 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
SOX6-216ENST00000533658 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
SOX6-216ENST00000533658 ADRA2BP18089 450 aa21.79■■□□□ 1.08
SOX6-216ENST00000533658 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
SOX6-216ENST00000533658 MAPK8IP2Q13387 824 aaPredicted RBP20.36■□□□□ 0.85
SOX6-216ENST00000533658 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
SOX6-216ENST00000533658 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
SOX6-216ENST00000533658 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
SOX6-216ENST00000533658 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
SOX6-216ENST00000533658 C1QBPQ07021 282 aaKnown RBP19.31■□□□□ 0.68
SOX6-216ENST00000533658 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
SOX6-216ENST00000533658 POTEHQ6S545 545 aa19.03■□□□□ 0.64
SOX6-216ENST00000533658 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
SOX6-216ENST00000533658 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
SOX6-216ENST00000533658 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
SOX6-216ENST00000533658 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
SOX6-216ENST00000533658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
SOX6-216ENST00000533658 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
SOX6-216ENST00000533658 DSG3P32926 999 aa18.03■□□□□ 0.48
SOX6-216ENST00000533658 CAPN15O75808 1086 aa17.9■□□□□ 0.46
SOX6-216ENST00000533658 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
SOX6-216ENST00000533658 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
SOX6-216ENST00000533658 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
SOX6-216ENST00000533658 ABCB7O75027 752 aa17.4■□□□□ 0.38
SOX6-216ENST00000533658 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
SOX6-216ENST00000533658 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
SOX6-216ENST00000533658 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
SOX6-216ENST00000533658 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
SOX6-216ENST00000533658 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
SOX6-216ENST00000533658 APLP2Q06481 763 aa17.24■□□□□ 0.35
SOX6-216ENST00000533658 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
SOX6-216ENST00000533658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
SOX6-216ENST00000533658 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
SOX6-216ENST00000533658 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
SOX6-216ENST00000533658 KCNA4P22459 653 aa16.91■□□□□ 0.3
SOX6-216ENST00000533658 HAX1O00165 279 aa16.66■□□□□ 0.26
SOX6-216ENST00000533658 POLA2Q14181 598 aa16.66■□□□□ 0.26
SOX6-216ENST00000533658 PIP4P2Q8N4L2 257 aa16.64■□□□□ 0.25
SOX6-216ENST00000533658 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
SOX6-216ENST00000533658 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
SOX6-216ENST00000533658 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
SOX6-216ENST00000533658 EVX2Q03828 476 aa16.4■□□□□ 0.22
SOX6-216ENST00000533658 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
SOX6-216ENST00000533658 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
SOX6-216ENST00000533658 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
SOX6-216ENST00000533658 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
SOX6-216ENST00000533658 LHX8Q68G74 356 aa16.2■□□□□ 0.18
SOX6-216ENST00000533658 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
SOX6-216ENST00000533658 PLSCR2Q9NRY7 297 aa16.13■□□□□ 0.17
SOX6-216ENST00000533658 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
SOX6-216ENST00000533658 GABBR2O75899 941 aa15.93■□□□□ 0.14
SOX6-216ENST00000533658 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
SOX6-216ENST00000533658 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
SOX6-216ENST00000533658 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
SOX6-216ENST00000533658 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
SOX6-216ENST00000533658 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
SOX6-216ENST00000533658 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
SOX6-216ENST00000533658 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
SOX6-216ENST00000533658 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
SOX6-216ENST00000533658 FBLN2P98095 1184 aa15.62■□□□□ 0.09
SOX6-216ENST00000533658 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
SOX6-216ENST00000533658 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
SOX6-216ENST00000533658 ZBTB22O15209 634 aa15.54■□□□□ 0.08
SOX6-216ENST00000533658 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
SOX6-216ENST00000533658 SSUH2Q9Y2M2 353 aa15.47■□□□□ 0.07
SOX6-216ENST00000533658 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
SOX6-216ENST00000533658 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
SOX6-216ENST00000533658 CLCN6P51797 869 aa15.36■□□□□ 0.05
SOX6-216ENST00000533658 POTEMA6NI47 508 aa15.31■□□□□ 0.04
SOX6-216ENST00000533658 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
SOX6-216ENST00000533658 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
SOX6-216ENST00000533658 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
SOX6-216ENST00000533658 POTEGQ6S5H5 508 aa15.22■□□□□ 0.03
SOX6-216ENST00000533658 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
SOX6-216ENST00000533658 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
SOX6-216ENST00000533658 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
SOX6-216ENST00000533658 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
SOX6-216ENST00000533658 POTEB2H3BUK9 544 aa15.08■□□□□ 0
SOX6-216ENST00000533658 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
SOX6-216ENST00000533658 ZRANB1Q9UGI0 708 aa14.93□□□□□ -0.02
SOX6-216ENST00000533658 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
SOX6-216ENST00000533658 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
SOX6-216ENST00000533658 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
SOX6-216ENST00000533658 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
SOX6-216ENST00000533658 LCE2DQ5TA82 110 aaPredicted RBP14.71□□□□□ -0.05
SOX6-216ENST00000533658 FAM163AQ96GL9 167 aaPredicted RBP14.69□□□□□ -0.06
SOX6-216ENST00000533658 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
SOX6-216ENST00000533658 MAMSTRQ6ZN01 415 aa14.65□□□□□ -0.06
SOX6-216ENST00000533658 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
SOX6-216ENST00000533658 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
SOX6-216ENST00000533658 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
SOX6-216ENST00000533658 METRNQ9UJH8 293 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms