RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	CCDC144A	A2RUR9	1427 aa		11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	MARF1	Q9Y4F3	1742 aa	Known RBP	11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	FANCI	Q9NVI1	1328 aa		11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	MYOM2	P54296	1465 aa		11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	ZRANB1	Q9UGI0	708 aa		11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	KTN1	Q86UP2	1357 aa	Known RBP	11.66	□□□□□ -0.54
CTNNA1-223	ENST00000520520	BCL9L	Q86UU0	1499 aa		11.65	□□□□□ -0.54
CTNNA1-223	ENST00000520520	ERICH6	Q7L0X2	663 aa		11.65	□□□□□ -0.54
CTNNA1-223	ENST00000520520	CCDC9	Q9Y3X0	531 aa	Known RBP	11.65	□□□□□ -0.54
CTNNA1-223	ENST00000520520	LRPPRC	P42704	1394 aa	Known RBP	11.65	□□□□□ -0.55
CTNNA1-223	ENST00000520520	KIF7	Q2M1P5	1343 aa		11.64	□□□□□ -0.55
CTNNA1-223	ENST00000520520	SPDYE4	A6NLX3	237 aa		11.64	□□□□□ -0.55
CTNNA1-223	ENST00000520520	CABLES1	Q8TDN4	633 aa		11.64	□□□□□ -0.55
CTNNA1-223	ENST00000520520	GJD4	Q96KN9	370 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNNA1-223	ENST00000520520	USP47	Q96K76	1375 aa		11.64	□□□□□ -0.55
CTNNA1-223	ENST00000520520		A0A0G2JS52	829 aa		11.63	□□□□□ -0.55
CTNNA1-223	ENST00000520520	KRT28	Q7Z3Y7	464 aa		11.63	□□□□□ -0.55
CTNNA1-223	ENST00000520520	SMG6	Q86US8	1419 aa	Known RBP	11.62	□□□□□ -0.55
CTNNA1-223	ENST00000520520	PRAG1	Q86YV5	1406 aa		11.62	□□□□□ -0.55
CTNNA1-223	ENST00000520520	FMN2	Q9NZ56	1722 aa		11.62	□□□□□ -0.55
CTNNA1-223	ENST00000520520	IFT172	Q9UG01	1749 aa		11.62	□□□□□ -0.55
CTNNA1-223	ENST00000520520	RGPD8	O14715	1765 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNNA1-223	ENST00000520520	UNC5CL	Q8IV45	518 aa		11.61	□□□□□ -0.55
CTNNA1-223	ENST00000520520	SPATA31A3	Q5VYP0	1347 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	KNDC1	Q76NI1	1749 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	KIF1A	Q12756	1690 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	GLI3	P10071	1580 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	DEFB132	Q7Z7B7	95 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	PHF8	Q9UPP1	1060 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	USP32	Q8NFA0	1604 aa		11.6	□□□□□ -0.55
CTNNA1-223	ENST00000520520	ABCC11	Q96J66	1382 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	BRWD3	Q6RI45	1802 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	SF3B2	Q13435	895 aa	Known RBP	11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	CFAP70	Q5T0N1	1121 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	SEPT12	Q8IYM1	358 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	PMFBP1	Q8TBY8	1022 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	TECPR2	O15040	1411 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	PIK3C2G	O75747	1445 aa		11.59	□□□□□ -0.55
CTNNA1-223	ENST00000520520	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PSME1	Q06323	249 aa		11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	NBPF8	Q3BBV2	869 aa		11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	FAM9B	Q8IZU0	186 aa		11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PRAM1	Q96QH2	718 aa		11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	TNS3	Q68CZ2	1445 aa		11.58	□□□□□ -0.56
CTNNA1-223	ENST00000520520	SLIT2	O94813	1529 aa		11.57	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PLCH1	Q4KWH8	1693 aa		11.57	□□□□□ -0.56
CTNNA1-223	ENST00000520520	CCDC125	Q86Z20	511 aa		11.57	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PROM2	Q8N271	834 aa		11.57	□□□□□ -0.56
CTNNA1-223	ENST00000520520	POGK	Q9P215	609 aa		11.57	□□□□□ -0.56
CTNNA1-223	ENST00000520520	BLM	P54132	1417 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PSD	A5PKW4	1024 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	SPDYE2B	A6NHP3	402 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	SPDYE6	P0CI01	402 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	VPS72	Q15906	364 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	FAM98C	Q17RN3	349 aa	Known RBP	11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	SPDYE2	Q495Y8	402 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	KRT27	Q7Z3Y8	459 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	C14orf93	Q9H972	538 aa	Known RBP	11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	TRAK1	Q9UPV9	953 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	NUDC	Q9Y266	331 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	ABCA3	Q99758	1704 aa		11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	BRD4	O60885	1362 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNNA1-223	ENST00000520520	FAM83G	A6ND36	823 aa		11.53	□□□□□ -0.56
CTNNA1-223	ENST00000520520	PAK3	O75914	559 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNNA1-223	ENST00000520520	FAM182B	Q5T319	152 aa		11.53	□□□□□ -0.56
CTNNA1-223	ENST00000520520	KDM2A	Q9Y2K7	1162 aa		11.53	□□□□□ -0.56
CTNNA1-223	ENST00000520520	NRXN1	Q9ULB1	1477 aa		11.52	□□□□□ -0.56
CTNNA1-223	ENST00000520520	C11orf95	C9JLR9	678 aa	Predicted RBP	11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	RALBP1	Q15311	655 aa		11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	ZNF692	Q9BU19	519 aa	Predicted RBP	11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	BTG4	Q9NY30	223 aa		11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	SSUH2	Q9Y2M2	353 aa		11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	TRPM1	Q7Z4N2	1603 aa		11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	ARHGEF10	O15013	1369 aa		11.52	□□□□□ -0.57
CTNNA1-223	ENST00000520520	NWD2	Q9ULI1	1742 aa		11.51	□□□□□ -0.57
CTNNA1-223	ENST00000520520	SBNO1	A3KN83	1393 aa		11.51	□□□□□ -0.57
CTNNA1-223	ENST00000520520	INSR	P06213	1382 aa		11.51	□□□□□ -0.57
CTNNA1-223	ENST00000520520	IRX6	P78412	446 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNA1-223	ENST00000520520	CARD11	Q9BXL7	1154 aa		11.5	□□□□□ -0.57
CTNNA1-223	ENST00000520520	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.5	□□□□□ -0.57
CTNNA1-223	ENST00000520520	BAG6	P46379	1132 aa		11.49	□□□□□ -0.57
CTNNA1-223	ENST00000520520	NGDN	Q8NEJ9	315 aa	Known RBP	11.49	□□□□□ -0.57
CTNNA1-223	ENST00000520520	TMC1	Q8TDI8	760 aa		11.49	□□□□□ -0.57
CTNNA1-223	ENST00000520520	SIRT1	Q96EB6	747 aa		11.49	□□□□□ -0.57
CTNNA1-223	ENST00000520520	GPRASP1	Q5JY77	1395 aa		11.49	□□□□□ -0.57
CTNNA1-223	ENST00000520520	EN1	Q05925	392 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNNA1-223	ENST00000520520	CCDC184	Q52MB2	194 aa		11.48	□□□□□ -0.57
CTNNA1-223	ENST00000520520	NUTM2G	Q5VZR2	741 aa		11.48	□□□□□ -0.57
CTNNA1-223	ENST00000520520	RNF123	Q5XPI4	1314 aa		11.48	□□□□□ -0.57
CTNNA1-223	ENST00000520520	NRAP	Q86VF7	1730 aa		11.48	□□□□□ -0.57
CTNNA1-223	ENST00000520520	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNNA1-223	ENST00000520520	ANKAR	Q7Z5J8	1434 aa		11.47	□□□□□ -0.57
CTNNA1-223	ENST00000520520	PRR36	Q9H6K5	1346 aa		11.47	□□□□□ -0.57
CTNNA1-223	ENST00000520520	DCAF11	Q8TEB1	546 aa		11.47	□□□□□ -0.57
CTNNA1-223	ENST00000520520	STRN4	Q9NRL3	753 aa		11.47	□□□□□ -0.57
CTNNA1-223	ENST00000520520	CHRNA2	Q15822	529 aa		11.46	□□□□□ -0.57
CTNNA1-223	ENST00000520520	POLR3GL	Q9BT43	218 aa		11.46	□□□□□ -0.57

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