RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.72□□□□□ -1.17
SDCBP-207ENST00000520168 TRPC5Q9UL62 973 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-207ENST00000520168 RRP7BPQ9NSQ0 103 aa7.71□□□□□ -1.18
SDCBP-207ENST00000520168 ATRNO75882 1429 aa7.7□□□□□ -1.18
SDCBP-207ENST00000520168 E9PCH4 1651 aa7.7□□□□□ -1.18
SDCBP-207ENST00000520168 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
SDCBP-207ENST00000520168 TMEM121BQ9BXQ6 578 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-207ENST00000520168 NRXN3Q9Y4C0 1643 aa7.7□□□□□ -1.18
SDCBP-207ENST00000520168 BLMP54132 1417 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-207ENST00000520168 VPS8Q8N3P4 1428 aa7.69□□□□□ -1.18
SDCBP-207ENST00000520168 ADGRL3Q9HAR2 1447 aa7.69□□□□□ -1.18
SDCBP-207ENST00000520168 ADGRL2O95490 1459 aa7.69□□□□□ -1.18
SDCBP-207ENST00000520168 MKRN3Q13064 507 aaKnown RBP7.69□□□□□ -1.18
SDCBP-207ENST00000520168 USP21Q9UK80 565 aa7.69□□□□□ -1.18
SDCBP-207ENST00000520168 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
SDCBP-207ENST00000520168 BRWD3Q6RI45 1802 aa7.68□□□□□ -1.18
SDCBP-207ENST00000520168 FNBP4Q8N3X1 1017 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-207ENST00000520168 PTPRUQ92729 1446 aa7.68□□□□□ -1.18
SDCBP-207ENST00000520168 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
SDCBP-207ENST00000520168 L3MBTL3Q96JM7 780 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-207ENST00000520168 ADAMTS2O95450 1211 aa7.66□□□□□ -1.18
SDCBP-207ENST00000520168 PSEN1P49768 467 aa7.66□□□□□ -1.18
SDCBP-207ENST00000520168 SLC24A1O60721 1099 aa7.65□□□□□ -1.18
SDCBP-207ENST00000520168 SOS2Q07890 1332 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-207ENST00000520168 SF3B2Q13435 895 aaKnown RBP7.65□□□□□ -1.18
SDCBP-207ENST00000520168 C1orf167Q5SNV9 1468 aa7.65□□□□□ -1.18
SDCBP-207ENST00000520168 C3orf67Q6ZVT6 689 aa7.65□□□□□ -1.18
SDCBP-207ENST00000520168 NWD2Q9ULI1 1742 aa7.65□□□□□ -1.18
SDCBP-207ENST00000520168 ANKRD50Q9ULJ7 1429 aa7.65□□□□□ -1.18
SDCBP-207ENST00000520168 RGPD1P0DJD0 1748 aa7.64□□□□□ -1.19
SDCBP-207ENST00000520168 MYOM2P54296 1465 aa7.64□□□□□ -1.19
SDCBP-207ENST00000520168 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
SDCBP-207ENST00000520168 CHGAP10645 457 aaKnown RBP7.64□□□□□ -1.19
SDCBP-207ENST00000520168 KIF1BO60333 1816 aa7.64□□□□□ -1.19
SDCBP-207ENST00000520168 GLI3P10071 1580 aa7.63□□□□□ -1.19
SDCBP-207ENST00000520168 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-207ENST00000520168 RTN4Q9NQC3 1192 aaKnown RBP7.63□□□□□ -1.19
SDCBP-207ENST00000520168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.63□□□□□ -1.19
SDCBP-207ENST00000520168 PRAG1Q86YV5 1406 aa7.62□□□□□ -1.19
SDCBP-207ENST00000520168 PDAP1Q13442 181 aaKnown RBP7.62□□□□□ -1.19
SDCBP-207ENST00000520168 USP32Q8NFA0 1604 aa7.62□□□□□ -1.19
SDCBP-207ENST00000520168 RALGAPBQ86X10 1494 aa7.62□□□□□ -1.19
SDCBP-207ENST00000520168 PLCH1Q4KWH8 1693 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 NPHP3Q7Z494 1330 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 KANK4Q5T7N3 995 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-207ENST00000520168 SPOCK2Q92563 424 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 CHIC2Q9UKJ5 165 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 CDC42BPGQ6DT37 1551 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 SLIT2O94813 1529 aa7.61□□□□□ -1.19
SDCBP-207ENST00000520168 KIF1AQ12756 1690 aa7.6□□□□□ -1.19
SDCBP-207ENST00000520168 LRPPRCP42704 1394 aaKnown RBP7.6□□□□□ -1.19
SDCBP-207ENST00000520168 DDX17Q92841 729 aaKnown RBP7.6□□□□□ -1.19
SDCBP-207ENST00000520168 NEXMIFQ5QGS0 1516 aa7.6□□□□□ -1.19
SDCBP-207ENST00000520168 PXDNQ92626 1479 aa7.6□□□□□ -1.19
SDCBP-207ENST00000520168 HFM1A2PYH4 1435 aa7.6□□□□□ -1.19
SDCBP-207ENST00000520168 METP08581 1390 aa7.59□□□□□ -1.19
SDCBP-207ENST00000520168 BAG6P46379 1132 aa7.59□□□□□ -1.19
SDCBP-207ENST00000520168 UNC5CLQ8IV45 518 aa7.59□□□□□ -1.19
SDCBP-207ENST00000520168 MARVELD3Q96A59 401 aa7.59□□□□□ -1.19
SDCBP-207ENST00000520168 ADGRB2O60241 1585 aa7.59□□□□□ -1.2
SDCBP-207ENST00000520168 HRCP23327 699 aa7.58□□□□□ -1.2
SDCBP-207ENST00000520168 IFNLR1Q8IU57 520 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-207ENST00000520168 CIZ1Q9ULV3 898 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-207ENST00000520168 ABCA3Q99758 1704 aa7.58□□□□□ -1.2
SDCBP-207ENST00000520168 TNS1Q9HBL0 1735 aaKnown RBP7.58□□□□□ -1.2
SDCBP-207ENST00000520168 DEFB132Q7Z7B7 95 aa7.57□□□□□ -1.2
SDCBP-207ENST00000520168 DISP2A7MBM2 1401 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 YY1P25490 414 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
SDCBP-207ENST00000520168 SPNS2Q8IVW8 549 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 ORAI2Q96SN7 254 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 ROCK1Q13464 1354 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 UTRNP46939 3433 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 PPLO60437 1756 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 CLTCL1P53675 1640 aa7.56□□□□□ -1.2
SDCBP-207ENST00000520168 KNDC1Q76NI1 1749 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 FMN2Q9NZ56 1722 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 CCDC144AA2RUR9 1427 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 ONECUT3O60422 494 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-207ENST00000520168 EMP3P54852 163 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 MMRN1Q13201 1228 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 KRT27Q7Z3Y8 459 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 CABP2Q9NPB3 220 aa7.55□□□□□ -1.2
SDCBP-207ENST00000520168 RREB1Q92766 1687 aa7.54□□□□□ -1.2
SDCBP-207ENST00000520168 PSDA5PKW4 1024 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-207ENST00000520168 G3V3G9 751 aa7.54□□□□□ -1.2
SDCBP-207ENST00000520168 VPS72Q15906 364 aa7.54□□□□□ -1.2
SDCBP-207ENST00000520168 SEPT12Q8IYM1 358 aa7.54□□□□□ -1.2
SDCBP-207ENST00000520168 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
SDCBP-207ENST00000520168 IFT172Q9UG01 1749 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 VGFO15240 615 aaPredicted RBP7.53□□□□□ -1.2
SDCBP-207ENST00000520168 ESCO1Q5FWF5 840 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 DPY19L2Q6NUT2 758 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 BOLA1Q9Y3E2 137 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 NUP155O75694 1391 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 PARD3Q8TEW0 1356 aa7.53□□□□□ -1.2
SDCBP-207ENST00000520168 RGPD8O14715 1765 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-207ENST00000520168 COL14A1Q05707 1796 aaKnown RBP7.52□□□□□ -1.21
SDCBP-207ENST00000520168 CHD4Q14839 1912 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms