RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GLMNQ92990 594 aa7.92□□□□□ -1.14
HMGB1P23-201ENST00000518743 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
HMGB1P23-201ENST00000518743 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 IQSEC2Q5JU85 1478 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 CUL7Q14999 1698 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 YEATS2Q9ULM3 1422 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 FDX1P10109 184 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 HSPA1LP34931 641 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 GCGRP47871 477 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 QPCTQ16769 361 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 HOXA2O43364 376 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 NDUFV2P19404 249 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 SOX11P35716 441 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 ANKRD13DQ6ZTN6 518 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 NECTIN2Q92692 538 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 TBC1D2BQ9UPU7 963 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 MTMR2Q13614 643 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 RETREG2Q8NC44 543 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PBXIP1Q96AQ6 731 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PCDHB15Q9Y5E8 787 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 ABCC2Q92887 1545 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 MMRN1Q13201 1228 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P23-201ENST00000518743 PTPRTO14522 1441 aa7.86□□□□□ -1.15
HMGB1P23-201ENST00000518743 LTBP4Q8N2S1 1624 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 PSEN2P49810 448 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 PBX2P40425 430 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 CABLES1Q8TDN4 633 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 RABGEF1Q9UJ41 708 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 SETD1AO15047 1707 aaKnown RBP7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 KCNA1Q09470 495 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 DMRTA1Q5VZB9 504 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 KIAA1468Q9P260 1216 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 BRD1O95696 1058 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 PTPRGP23470 1445 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
HMGB1P23-201ENST00000518743 CUX1P39880 1505 aa7.81□□□□□ -1.16
HMGB1P23-201ENST00000518743 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 SMAPO00193 183 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 CTDSPL2Q05D32 466 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 IRF5Q13568 498 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 FAM98CQ17RN3 349 aaKnown RBP7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 SWT1Q5T5J6 900 aaKnown RBP7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 TSC1Q92574 1164 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 PRR14Q9BWN1 585 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 ATP6V1AP38606 617 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 Q3C1V9 767 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 B4GALNT3Q6L9W6 998 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 SEMA3FQ13275 785 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 DESI1Q6ICB0 168 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 NBPF3Q9H094 633 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 FER1L4A9Z1Z3 1794 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 SLC10A3P09131 477 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MLECQ14165 292 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 ALG2Q9H553 416 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MYT1LQ9UL68 1186 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MAGI3Q5TCQ9 1506 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 POGZQ7Z3K3 1410 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 RETREG3Q86VR2 466 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 UHRF1BP1Q6BDS2 1440 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms