RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
SH3D19-209ENST00000514013 CDC42BPGQ6DT37 1551 aa13.97□□□□□ -0.17
SH3D19-209ENST00000514013 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
SH3D19-209ENST00000514013 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
SH3D19-209ENST00000514013 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
SH3D19-209ENST00000514013 HRCP23327 699 aa13.96□□□□□ -0.17
SH3D19-209ENST00000514013 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
SH3D19-209ENST00000514013 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
SH3D19-209ENST00000514013 NAIPQ13075 1403 aa13.94□□□□□ -0.18
SH3D19-209ENST00000514013 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
SH3D19-209ENST00000514013 ITGAEP38570 1179 aa13.93□□□□□ -0.18
SH3D19-209ENST00000514013 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
SH3D19-209ENST00000514013 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
SH3D19-209ENST00000514013 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
SH3D19-209ENST00000514013 ONECUT3O60422 494 aaPredicted RBP13.92□□□□□ -0.18
SH3D19-209ENST00000514013 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
SH3D19-209ENST00000514013 VPS72Q15906 364 aa13.92□□□□□ -0.18
SH3D19-209ENST00000514013 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
SH3D19-209ENST00000514013 KRT27Q7Z3Y8 459 aa13.91□□□□□ -0.18
SH3D19-209ENST00000514013 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
SH3D19-209ENST00000514013 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
SH3D19-209ENST00000514013 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
SH3D19-209ENST00000514013 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
SH3D19-209ENST00000514013 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
SH3D19-209ENST00000514013 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
SH3D19-209ENST00000514013 R3HDM1Q15032 1099 aaKnown RBP13.87□□□□□ -0.19
SH3D19-209ENST00000514013 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
SH3D19-209ENST00000514013 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
SH3D19-209ENST00000514013 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
SH3D19-209ENST00000514013 STK26Q9P289 416 aa13.87□□□□□ -0.19
SH3D19-209ENST00000514013 TECPR2O15040 1411 aa13.87□□□□□ -0.19
SH3D19-209ENST00000514013 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 BAG6P46379 1132 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
SH3D19-209ENST00000514013 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
SH3D19-209ENST00000514013 KIF1BO60333 1816 aa13.85□□□□□ -0.19
SH3D19-209ENST00000514013 MIER1Q8N108 512 aa13.85□□□□□ -0.19
SH3D19-209ENST00000514013 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
SH3D19-209ENST00000514013 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
SH3D19-209ENST00000514013 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
SH3D19-209ENST00000514013 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
SH3D19-209ENST00000514013 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
SH3D19-209ENST00000514013 MAP3K13O43283 966 aa13.83□□□□□ -0.2
SH3D19-209ENST00000514013 PCDH10Q9P2E7 1040 aa13.83□□□□□ -0.2
SH3D19-209ENST00000514013 PPLO60437 1756 aa13.83□□□□□ -0.2
SH3D19-209ENST00000514013 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 A0A0G2JS52 829 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
SH3D19-209ENST00000514013 MYT1Q01538 1121 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 ABCC11Q96J66 1382 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
SH3D19-209ENST00000514013 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
SH3D19-209ENST00000514013 TIE1P35590 1138 aa13.81□□□□□ -0.2
SH3D19-209ENST00000514013 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
SH3D19-209ENST00000514013 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
SH3D19-209ENST00000514013 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
SH3D19-209ENST00000514013 RRBP1Q9P2E9 1410 aaKnown RBP13.8□□□□□ -0.2
SH3D19-209ENST00000514013 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
SH3D19-209ENST00000514013 YY1P25490 414 aa13.79□□□□□ -0.2
SH3D19-209ENST00000514013 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
SH3D19-209ENST00000514013 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
SH3D19-209ENST00000514013 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
SH3D19-209ENST00000514013 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
SH3D19-209ENST00000514013 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
SH3D19-209ENST00000514013 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
SH3D19-209ENST00000514013 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
SH3D19-209ENST00000514013 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.21
SH3D19-209ENST00000514013 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
SH3D19-209ENST00000514013 CAMKK2Q96RR4 588 aa13.77□□□□□ -0.21
SH3D19-209ENST00000514013 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
SH3D19-209ENST00000514013 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
SH3D19-209ENST00000514013 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
SH3D19-209ENST00000514013 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
SH3D19-209ENST00000514013 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
SH3D19-209ENST00000514013 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
SH3D19-209ENST00000514013 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
SH3D19-209ENST00000514013 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
SH3D19-209ENST00000514013 PSME1Q06323 249 aa13.75□□□□□ -0.21
SH3D19-209ENST00000514013 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
SH3D19-209ENST00000514013 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
SH3D19-209ENST00000514013 TRIM37O94972 964 aa13.73□□□□□ -0.21
SH3D19-209ENST00000514013 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
SH3D19-209ENST00000514013 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
SH3D19-209ENST00000514013 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
SH3D19-209ENST00000514013 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.21
SH3D19-209ENST00000514013 SEC24BO95487 1268 aa13.71□□□□□ -0.21
SH3D19-209ENST00000514013 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
SH3D19-209ENST00000514013 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
SH3D19-209ENST00000514013 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.22
SH3D19-209ENST00000514013 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.22
SH3D19-209ENST00000514013 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
SH3D19-209ENST00000514013 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
SH3D19-209ENST00000514013 APBA3O96018 575 aa13.69□□□□□ -0.22
SH3D19-209ENST00000514013 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms