RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 FHOD3Q2V2M9 1422 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 PEG3Q9GZU2 1588 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 FAM114A1Q8IWE2 563 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 SYNJ1O43426 1573 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 PLCB2Q00722 1185 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 GCC1Q96CN9 775 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 KLHL40Q2TBA0 621 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 IFT57Q9NWB7 429 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 ITGB1BP2Q9UKP3 347 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
LINC02397-201ENST00000504409 TDO2P48775 406 aa7.22□□□□□ -1.25
LINC02397-201ENST00000504409 R3HCC1Q9Y3T6 440 aaKnown RBP7.22□□□□□ -1.25
LINC02397-201ENST00000504409 ABCA5Q8WWZ7 1642 aa7.22□□□□□ -1.25
LINC02397-201ENST00000504409 NBPF7P0C2Y1 421 aaPredicted RBP7.22□□□□□ -1.25
LINC02397-201ENST00000504409 CCDC47Q96A33 483 aaKnown RBP7.22□□□□□ -1.25
LINC02397-201ENST00000504409 C22orf23Q9BZE7 217 aa7.22□□□□□ -1.25
LINC02397-201ENST00000504409 NCAPD3P42695 1498 aa7.22□□□□□ -1.25
LINC02397-201ENST00000504409 VIRMAQ69YN4 1812 aaKnown RBP7.22□□□□□ -1.25
LINC02397-201ENST00000504409 CCDC141Q6ZP82 1450 aa7.22□□□□□ -1.25
LINC02397-201ENST00000504409 HSP90AB4PQ58FF6 505 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 ZKSCAN2Q63HK3 967 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 MCM4P33991 863 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 SEPT14Q6ZU15 432 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 C14orf37Q86TY3 774 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 JMYQ8N9B5 988 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 MYOM3Q5VTT5 1437 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 KIF3CO14782 793 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.21□□□□□ -1.25
LINC02397-201ENST00000504409 PPP6R1Q9UPN7 881 aa7.21□□□□□ -1.25
LINC02397-201ENST00000504409 FGD1P98174 961 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 BUB1BO60566 1050 aaPredicted RBP7.21□□□□□ -1.26
LINC02397-201ENST00000504409 PSMA5P28066 241 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 ZBTB17Q13105 803 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 HOMER1Q86YM7 354 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 RNF168Q8IYW5 571 aaPredicted RBP7.21□□□□□ -1.26
LINC02397-201ENST00000504409 LRRC9Q6ZRR7 1453 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 ARHGEF12Q9NZN5 1544 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 ZKSCAN1P17029 563 aaPredicted RBP7.21□□□□□ -1.26
LINC02397-201ENST00000504409 CNPY4Q8N129 248 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 CTTNBP2Q8WZ74 1663 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 CDC45O75419 566 aa7.21□□□□□ -1.26
LINC02397-201ENST00000504409 ARHGAP25P42331 645 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC196A0A1B0GTZ2 297 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 ZBTB7CA1YPR0 619 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 KCNJ4P48050 445 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 LMNB2Q03252 620 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 GNL2Q13823 731 aaKnown RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 B4GALNT4Q76KP1 1039 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CROCCP2Q86T23 111 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CASKIN1Q8WXD9 1431 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 SMTNL1A8MU46 457 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 PATL2C9JE40 543 aaKnown RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 RSRC1Q96IZ7 334 aaKnown RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 LUC7L3O95232 432 aaKnown RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 USP47Q96K76 1375 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC150Q8NCX0 1101 aa7.2□□□□□ -1.26
LINC02397-201ENST00000504409 CPLX2Q6PUV4 134 aaKnown RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 PPP1R1BQ9UD71 204 aaPredicted RBP7.2□□□□□ -1.26
LINC02397-201ENST00000504409 NKTRP30414 1462 aaKnown RBP7.19□□□□□ -1.26
LINC02397-201ENST00000504409 SRCIN1Q9C0H9 1055 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 EPB41L2O43491 1005 aaKnown RBP7.19□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC73Q6ZRK6 1079 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 CLUAP1Q96AJ1 413 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 GCC2Q8IWJ2 1684 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 KIF14Q15058 1648 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 DMTNQ08495 405 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 GBP7Q8N8V2 638 aaPredicted RBP7.19□□□□□ -1.26
LINC02397-201ENST00000504409 STMN4Q9H169 189 aaPredicted RBP7.19□□□□□ -1.26
LINC02397-201ENST00000504409 HOOK3Q86VS8 718 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 UBXN4Q92575 508 aa7.19□□□□□ -1.26
LINC02397-201ENST00000504409 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
LINC02397-201ENST00000504409 TPD52L1Q16890 204 aaPredicted RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 KLHL10Q6JEL2 608 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 NLRP5P59047 1200 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 PYM1Q9BRP8 204 aaKnown RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 TTC31Q49AM3 519 aaPredicted RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC30Q5VVM6 783 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 SPECC1LQ69YQ0 1117 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 OLFM4Q6UX06 510 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 GDAP1L1Q96MZ0 367 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 CFAP45Q9UL16 551 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 ZKSCAN5Q9Y2L8 839 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 TEX2Q8IWB9 1127 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 ZNF396Q96N95 335 aaPredicted RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 NOL7Q9UMY1 257 aaKnown RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 BIVM-ERCC5R4GMW8 1640 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 WIZO95785 1651 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 FGD6Q6ZV73 1430 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 DHX16O60231 1041 aaKnown RBP7.18□□□□□ -1.26
LINC02397-201ENST00000504409 SLC20A2Q08357 652 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 LRRCC1Q9C099 1032 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 SNX21Q969T3 373 aa7.18□□□□□ -1.26
LINC02397-201ENST00000504409 GPRASP1Q5JY77 1395 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 SNAPC4Q5SXM2 1469 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 RALGAPBQ86X10 1494 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms