RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 RWDD1Q9H446 243 aaPredicted RBP24.5■■□□□ 1.51
SNAPC3-206ENST00000490969 PKNOX2Q96KN3 472 aa24.49■■□□□ 1.51
SNAPC3-206ENST00000490969 TNNQ9UQP3 1299 aa24.49■■□□□ 1.51
SNAPC3-206ENST00000490969 HSP90AA1P07900 732 aaKnown RBP24.49■■□□□ 1.51
SNAPC3-206ENST00000490969 STK26Q9P289 416 aa24.47■■□□□ 1.51
SNAPC3-206ENST00000490969 POLR3AO14802 1390 aaPredicted RBP24.46■■□□□ 1.51
SNAPC3-206ENST00000490969 HSP90AA2PQ14568 343 aaPredicted RBP24.46■■□□□ 1.51
SNAPC3-206ENST00000490969 C22orf23Q9BZE7 217 aa24.46■■□□□ 1.51
SNAPC3-206ENST00000490969 ZFYVE9O95405 1425 aa24.46■■□□□ 1.51
SNAPC3-206ENST00000490969 RRP9O43818 475 aaKnown RBP24.46■■□□□ 1.51
SNAPC3-206ENST00000490969 SAFB2Q14151 953 aaKnown RBP eCLIP24.44■■□□□ 1.5
SNAPC3-206ENST00000490969 CARD14Q9BXL6 1004 aa24.44■■□□□ 1.5
SNAPC3-206ENST00000490969 NEUROD2Q15784 382 aa24.43■■□□□ 1.5
SNAPC3-206ENST00000490969 GRPEL1Q9HAV7 217 aa24.43■■□□□ 1.5
SNAPC3-206ENST00000490969 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
SNAPC3-206ENST00000490969 MYH16Q9H6N6 1097 aa24.43■■□□□ 1.5
SNAPC3-206ENST00000490969 DDX11L8A8MPP1 907 aa24.42■■□□□ 1.5
SNAPC3-206ENST00000490969 MFAP1P55081 439 aaKnown RBP24.42■■□□□ 1.5
SNAPC3-206ENST00000490969 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
SNAPC3-206ENST00000490969 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
SNAPC3-206ENST00000490969 TNRQ92752 1358 aa24.41■■□□□ 1.5
SNAPC3-206ENST00000490969 RIMS2Q9UQ26 1411 aa24.41■■□□□ 1.5
SNAPC3-206ENST00000490969 ISY1Q9ULR0 285 aaKnown RBP24.4■■□□□ 1.5
SNAPC3-206ENST00000490969 ESPNB1AK53 854 aa24.4■■□□□ 1.5
SNAPC3-206ENST00000490969 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
SNAPC3-206ENST00000490969 RUNDC1Q96C34 613 aa24.39■■□□□ 1.5
SNAPC3-206ENST00000490969 SHPRHQ149N8 1683 aa24.39■■□□□ 1.5
SNAPC3-206ENST00000490969 QRICH2Q9H0J4 1663 aa24.39■■□□□ 1.5
SNAPC3-206ENST00000490969 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
SNAPC3-206ENST00000490969 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.49
SNAPC3-206ENST00000490969 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
SNAPC3-206ENST00000490969 ARHGEF28Q8N1W1 1705 aaKnown RBP24.38■■□□□ 1.49
SNAPC3-206ENST00000490969 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
SNAPC3-206ENST00000490969 TCP11L2Q8N4U5 519 aa24.38■■□□□ 1.49
SNAPC3-206ENST00000490969 MVPQ14764 893 aaKnown RBP24.37■■□□□ 1.49
SNAPC3-206ENST00000490969 HSCBQ8IWL3 235 aa24.37■■□□□ 1.49
SNAPC3-206ENST00000490969 ALKQ9UM73 1620 aa24.37■■□□□ 1.49
SNAPC3-206ENST00000490969 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
SNAPC3-206ENST00000490969 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
SNAPC3-206ENST00000490969 PTPRMP28827 1452 aa24.36■■□□□ 1.49
SNAPC3-206ENST00000490969 ZMYND15Q9H091 742 aa24.35■■□□□ 1.49
SNAPC3-206ENST00000490969 SBNO2Q9Y2G9 1366 aa24.34■■□□□ 1.49
SNAPC3-206ENST00000490969 NCOA3Q9Y6Q9 1424 aa24.34■■□□□ 1.49
SNAPC3-206ENST00000490969 C3P01024 1663 aa24.32■■□□□ 1.48
SNAPC3-206ENST00000490969 DDIT3P35638 169 aa24.32■■□□□ 1.48
SNAPC3-206ENST00000490969 YTHDC2Q9H6S0 1430 aaKnown RBP24.32■■□□□ 1.48
SNAPC3-206ENST00000490969 FER1L4A9Z1Z3 1794 aa24.31■■□□□ 1.48
SNAPC3-206ENST00000490969 SLC12A5Q9H2X9 1139 aa24.31■■□□□ 1.48
SNAPC3-206ENST00000490969 ZKSCAN2Q63HK3 967 aa24.3■■□□□ 1.48
SNAPC3-206ENST00000490969 TRIM44Q96DX7 344 aaPredicted RBP24.3■■□□□ 1.48
SNAPC3-206ENST00000490969 PRAM1Q96QH2 718 aa24.3■■□□□ 1.48
SNAPC3-206ENST00000490969 CCDC27Q2M243 656 aa24.3■■□□□ 1.48
SNAPC3-206ENST00000490969 FTSJ3Q8IY81 847 aaKnown RBP24.3■■□□□ 1.48
SNAPC3-206ENST00000490969 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
SNAPC3-206ENST00000490969 UBR1Q8IWV7 1749 aa24.29■■□□□ 1.48
SNAPC3-206ENST00000490969 DZIP1LQ8IYY4 767 aaKnown RBP24.29■■□□□ 1.48
SNAPC3-206ENST00000490969 TULP4Q9NRJ4 1543 aa24.29■■□□□ 1.48
SNAPC3-206ENST00000490969 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
SNAPC3-206ENST00000490969 CABP2Q9NPB3 220 aa24.28■■□□□ 1.48
SNAPC3-206ENST00000490969 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 LTKP29376 864 aa24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 HDAC1Q13547 482 aaPredicted RBP24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 MINK1Q8N4C8 1332 aaPredicted RBP24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 METP08581 1390 aa24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 GAS2L3Q86XJ1 694 aa24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
SNAPC3-206ENST00000490969 SNX21Q969T3 373 aa24.26■■□□□ 1.47
SNAPC3-206ENST00000490969 TMEM2Q9UHN6 1383 aa24.25■■□□□ 1.47
SNAPC3-206ENST00000490969 NSD3Q9BZ95 1437 aa24.25■■□□□ 1.47
SNAPC3-206ENST00000490969 RBM25P49756 843 aaKnown RBP24.24■■□□□ 1.47
SNAPC3-206ENST00000490969 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
SNAPC3-206ENST00000490969 GBP4Q96PP9 640 aa24.24■■□□□ 1.47
SNAPC3-206ENST00000490969 CIZ1Q9ULV3 898 aaPredicted RBP24.24■■□□□ 1.47
SNAPC3-206ENST00000490969 TPM2P07951 284 aa24.22■■□□□ 1.47
SNAPC3-206ENST00000490969 SKOR2Q2VWA4 1001 aaPredicted RBP24.22■■□□□ 1.47
SNAPC3-206ENST00000490969 RAB3GAP1Q15042 981 aa24.21■■□□□ 1.47
SNAPC3-206ENST00000490969 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
SNAPC3-206ENST00000490969 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.2■■□□□ 1.46
SNAPC3-206ENST00000490969 DDX19BQ9UMR2 479 aa24.2■■□□□ 1.46
SNAPC3-206ENST00000490969 CT47B1P0C2W7 299 aaPredicted RBP24.19■■□□□ 1.46
SNAPC3-206ENST00000490969 TRIM27P14373 513 aa24.19■■□□□ 1.46
SNAPC3-206ENST00000490969 NCBP3Q53F19 620 aaKnown RBP24.19■■□□□ 1.46
SNAPC3-206ENST00000490969 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
SNAPC3-206ENST00000490969 MTHFSP49914 203 aa24.19■■□□□ 1.46
SNAPC3-206ENST00000490969 PTMSP20962 102 aa24.18■■□□□ 1.46
SNAPC3-206ENST00000490969 ITPRIPQ8IWB1 547 aa24.18■■□□□ 1.46
SNAPC3-206ENST00000490969 SMC4Q9NTJ3 1288 aa24.18■■□□□ 1.46
SNAPC3-206ENST00000490969 TXNDC2Q86VQ3 553 aa24.18■■□□□ 1.46
SNAPC3-206ENST00000490969 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
SNAPC3-206ENST00000490969 SRPK2P78362 688 aaKnown RBP24.16■■□□□ 1.46
SNAPC3-206ENST00000490969 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
SNAPC3-206ENST00000490969 SLC26A8Q96RN1 970 aa24.15■■□□□ 1.46
SNAPC3-206ENST00000490969 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
SNAPC3-206ENST00000490969 CCDC173Q0VFZ6 552 aa24.14■■□□□ 1.46
SNAPC3-206ENST00000490969 ADAMTS13Q76LX8 1427 aa24.14■■□□□ 1.45
SNAPC3-206ENST00000490969 ATF7IPQ6VMQ6 1270 aa24.14■■□□□ 1.45
SNAPC3-206ENST00000490969 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
SNAPC3-206ENST00000490969 EXOSC9Q06265 439 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms