RNA–Protein interactions for RNA: ENST00000480007.1

CLASP1-212, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-212ENST00000480007 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
CLASP1-212ENST00000480007 BRICD5Q6PL45 260 aa13.74□□□□□ -0.21
CLASP1-212ENST00000480007 RETREG3Q86VR2 466 aa13.74□□□□□ -0.21
CLASP1-212ENST00000480007 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
CLASP1-212ENST00000480007 FMNL1O95466 1100 aaPredicted RBP13.73□□□□□ -0.21
CLASP1-212ENST00000480007 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
CLASP1-212ENST00000480007 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
CLASP1-212ENST00000480007 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
CLASP1-212ENST00000480007 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
CLASP1-212ENST00000480007 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
CLASP1-212ENST00000480007 ZPR1O75312 459 aa13.71□□□□□ -0.21
CLASP1-212ENST00000480007 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
CLASP1-212ENST00000480007 CFAP99D6REC4 459 aa13.7□□□□□ -0.22
CLASP1-212ENST00000480007 USB1Q9BQ65 265 aaKnown RBP13.7□□□□□ -0.22
CLASP1-212ENST00000480007 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
CLASP1-212ENST00000480007 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
CLASP1-212ENST00000480007 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
CLASP1-212ENST00000480007 FLIIQ13045 1269 aa13.68□□□□□ -0.22
CLASP1-212ENST00000480007 HELBQ8NG08 1087 aaPredicted RBP13.68□□□□□ -0.22
CLASP1-212ENST00000480007 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
CLASP1-212ENST00000480007 CTTNBP2Q8WZ74 1663 aa13.67□□□□□ -0.22
CLASP1-212ENST00000480007 TLL1O43897 1013 aa13.67□□□□□ -0.22
CLASP1-212ENST00000480007 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
CLASP1-212ENST00000480007 SPSB2Q99619 263 aa13.67□□□□□ -0.22
CLASP1-212ENST00000480007 AP1G2O75843 785 aa13.66□□□□□ -0.22
CLASP1-212ENST00000480007 MCM6Q14566 821 aa13.66□□□□□ -0.22
CLASP1-212ENST00000480007 ZNF516Q92618 1163 aa13.66□□□□□ -0.22
CLASP1-212ENST00000480007 ADH1BP00325 375 aa13.65□□□□□ -0.22
CLASP1-212ENST00000480007 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
CLASP1-212ENST00000480007 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
CLASP1-212ENST00000480007 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
CLASP1-212ENST00000480007 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
CLASP1-212ENST00000480007 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
CLASP1-212ENST00000480007 TSC1Q92574 1164 aa13.64□□□□□ -0.23
CLASP1-212ENST00000480007 WDR62O43379 1518 aa13.64□□□□□ -0.23
CLASP1-212ENST00000480007 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLASP1-212ENST00000480007 FAM160A2Q8N612 972 aaPredicted RBP13.62□□□□□ -0.23
CLASP1-212ENST00000480007 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
CLASP1-212ENST00000480007 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
CLASP1-212ENST00000480007 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
CLASP1-212ENST00000480007 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
CLASP1-212ENST00000480007 SOCS7O14512 581 aa13.6□□□□□ -0.23
CLASP1-212ENST00000480007 JUNDP17535 347 aa13.6□□□□□ -0.23
CLASP1-212ENST00000480007 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
CLASP1-212ENST00000480007 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
CLASP1-212ENST00000480007 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
CLASP1-212ENST00000480007 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
CLASP1-212ENST00000480007 KCNC4Q03721 635 aa13.59□□□□□ -0.23
CLASP1-212ENST00000480007 PRDM9Q9NQV7 894 aa13.59□□□□□ -0.23
CLASP1-212ENST00000480007 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 DXOO77932 396 aaKnown RBP13.58□□□□□ -0.24
CLASP1-212ENST00000480007 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 FYCO1Q9BQS8 1478 aa13.58□□□□□ -0.24
CLASP1-212ENST00000480007 MMP16P51512 607 aa13.57□□□□□ -0.24
CLASP1-212ENST00000480007 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
CLASP1-212ENST00000480007 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
CLASP1-212ENST00000480007 LYPD8Q6UX82 237 aa13.56□□□□□ -0.24
CLASP1-212ENST00000480007 SLC6A16Q9GZN6 736 aa13.56□□□□□ -0.24
CLASP1-212ENST00000480007 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
CLASP1-212ENST00000480007 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
CLASP1-212ENST00000480007 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
CLASP1-212ENST00000480007 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
CLASP1-212ENST00000480007 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
CLASP1-212ENST00000480007 CFAP43Q8NDM7 1665 aa13.54□□□□□ -0.24
CLASP1-212ENST00000480007 PTPRNQ16849 979 aa13.54□□□□□ -0.24
CLASP1-212ENST00000480007 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
CLASP1-212ENST00000480007 APBB1O00213 710 aa13.53□□□□□ -0.24
CLASP1-212ENST00000480007 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
CLASP1-212ENST00000480007 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
CLASP1-212ENST00000480007 S1PR4O95977 384 aa13.51□□□□□ -0.25
CLASP1-212ENST00000480007 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
CLASP1-212ENST00000480007 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
CLASP1-212ENST00000480007 CCNYL3P0C7X3 344 aa13.49□□□□□ -0.25
CLASP1-212ENST00000480007 NUDT12Q9BQG2 462 aa13.49□□□□□ -0.25
CLASP1-212ENST00000480007 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
CLASP1-212ENST00000480007 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
CLASP1-212ENST00000480007 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
CLASP1-212ENST00000480007 F12P00748 615 aaPredicted RBP13.48□□□□□ -0.25
CLASP1-212ENST00000480007 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
CLASP1-212ENST00000480007 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
CLASP1-212ENST00000480007 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
CLASP1-212ENST00000480007 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
CLASP1-212ENST00000480007 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
CLASP1-212ENST00000480007 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
CLASP1-212ENST00000480007 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
CLASP1-212ENST00000480007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLASP1-212ENST00000480007 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
CLASP1-212ENST00000480007 POM121Q96HA1 1249 aa13.44□□□□□ -0.26
CLASP1-212ENST00000480007 MAP10Q9P2G4 905 aa13.44□□□□□ -0.26
CLASP1-212ENST00000480007 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
CLASP1-212ENST00000480007 NR6A1Q15406 480 aa13.43□□□□□ -0.26
CLASP1-212ENST00000480007 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
CLASP1-212ENST00000480007 PRM3Q9NNZ6 103 aa13.43□□□□□ -0.26
CLASP1-212ENST00000480007 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
CLASP1-212ENST00000480007 RAD21O60216 631 aa13.42□□□□□ -0.26
CLASP1-212ENST00000480007 GGCXP38435 758 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms