RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
LIMS2-213ENST00000469300 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
LIMS2-213ENST00000469300 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
LIMS2-213ENST00000469300 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 H3BQV1 296 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-213ENST00000469300 CLSTN1O94985 981 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
LIMS2-213ENST00000469300 TNRQ92752 1358 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
LIMS2-213ENST00000469300 WAPLQ7Z5K2 1190 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 CCT4P50991 539 aaKnown RBP18.36■□□□□ 0.53
LIMS2-213ENST00000469300 DUOX2Q9NRD8 1548 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 MARCH6O60337 910 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 APPP05067 770 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 ERC1Q8IUD2 1116 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
LIMS2-213ENST00000469300 SCAF11Q99590 1463 aaKnown RBP18.35■□□□□ 0.53
LIMS2-213ENST00000469300 A2MP01023 1474 aa18.35■□□□□ 0.53
LIMS2-213ENST00000469300 GZF1Q9H116 711 aaPredicted RBP18.34■□□□□ 0.53
LIMS2-213ENST00000469300 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
LIMS2-213ENST00000469300 LRPPRCP42704 1394 aaKnown RBP18.34■□□□□ 0.53
LIMS2-213ENST00000469300 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
LIMS2-213ENST00000469300 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
LIMS2-213ENST00000469300 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
LIMS2-213ENST00000469300 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
LIMS2-213ENST00000469300 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.53
LIMS2-213ENST00000469300 ANO2Q9NQ90 1003 aa18.33■□□□□ 0.53
LIMS2-213ENST00000469300 PRKCSHP14314 528 aaPredicted RBP18.33■□□□□ 0.53
LIMS2-213ENST00000469300 GNAI2P04899 355 aa18.33■□□□□ 0.52
LIMS2-213ENST00000469300 TNNT3P45378 269 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-213ENST00000469300 NOS1P29475 1434 aa18.33■□□□□ 0.52
LIMS2-213ENST00000469300 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 NSD2O96028 1365 aa18.32■□□□□ 0.52
LIMS2-213ENST00000469300 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
LIMS2-213ENST00000469300 KIAA2012Q0VF49 1180 aa18.32■□□□□ 0.52
LIMS2-213ENST00000469300 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
LIMS2-213ENST00000469300 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
LIMS2-213ENST00000469300 NUTM2BA6NNL0 878 aaPredicted RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 NUTM2EB1AL46 878 aaPredicted RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 SURF6O75683 361 aaKnown RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 NUTM2AQ8IVF1 878 aaPredicted RBP18.32■□□□□ 0.52
LIMS2-213ENST00000469300 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
LIMS2-213ENST00000469300 CPLX1O14810 134 aa18.31■□□□□ 0.52
LIMS2-213ENST00000469300 TRIM29Q14134 588 aa18.31■□□□□ 0.52
LIMS2-213ENST00000469300 WDR62O43379 1518 aa18.31■□□□□ 0.52
LIMS2-213ENST00000469300 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 NUP160Q12769 1436 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
LIMS2-213ENST00000469300 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 ERICH2A1L162 156 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 CDC45O75419 566 aa18.3■□□□□ 0.52
LIMS2-213ENST00000469300 HIP1O00291 1037 aa18.29■□□□□ 0.52
LIMS2-213ENST00000469300 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
LIMS2-213ENST00000469300 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
LIMS2-213ENST00000469300 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
LIMS2-213ENST00000469300 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
LIMS2-213ENST00000469300 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
LIMS2-213ENST00000469300 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
LIMS2-213ENST00000469300 CTTNBP2Q8WZ74 1663 aa18.28■□□□□ 0.52
LIMS2-213ENST00000469300 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-213ENST00000469300 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
LIMS2-213ENST00000469300 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
LIMS2-213ENST00000469300 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-213ENST00000469300 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
LIMS2-213ENST00000469300 GOLGA6L3A6NEY3 463 aa18.27■□□□□ 0.52
LIMS2-213ENST00000469300 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
LIMS2-213ENST00000469300 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
LIMS2-213ENST00000469300 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-213ENST00000469300 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
LIMS2-213ENST00000469300 XPCQ01831 940 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-213ENST00000469300 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
LIMS2-213ENST00000469300 WASHC4Q2M389 1173 aa18.25■□□□□ 0.51
LIMS2-213ENST00000469300 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
LIMS2-213ENST00000469300 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
LIMS2-213ENST00000469300 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-213ENST00000469300 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
LIMS2-213ENST00000469300 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
LIMS2-213ENST00000469300 PIP4K2BP78356 416 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-213ENST00000469300 GNL3LQ9NVN8 582 aaKnown RBP18.24■□□□□ 0.51
LIMS2-213ENST00000469300 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 FOXO3O43524 673 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 ARID3AQ99856 593 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 SYCP2Q9BX26 1530 aa18.24■□□□□ 0.51
LIMS2-213ENST00000469300 PSMA5P28066 241 aa18.23■□□□□ 0.51
LIMS2-213ENST00000469300 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
LIMS2-213ENST00000469300 STARD3NLO95772 234 aa18.22■□□□□ 0.51
LIMS2-213ENST00000469300 NFXL1Q6ZNB6 911 aa18.22■□□□□ 0.51
LIMS2-213ENST00000469300 NME9Q86XW9 330 aa18.22■□□□□ 0.51
LIMS2-213ENST00000469300 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
LIMS2-213ENST00000469300 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
LIMS2-213ENST00000469300 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
LIMS2-213ENST00000469300 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms