RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-205ENST00000466780 EVC2Q86UK5 1308 aa16.4■□□□□ 0.22
PDZRN3-205ENST00000466780 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.22
PDZRN3-205ENST00000466780 GLI2P10070 1586 aa16.39■□□□□ 0.21
PDZRN3-205ENST00000466780 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-205ENST00000466780 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
PDZRN3-205ENST00000466780 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
PDZRN3-205ENST00000466780 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
PDZRN3-205ENST00000466780 DDIT3P35638 169 aa16.38■□□□□ 0.21
PDZRN3-205ENST00000466780 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
PDZRN3-205ENST00000466780 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
PDZRN3-205ENST00000466780 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-205ENST00000466780 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
PDZRN3-205ENST00000466780 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
PDZRN3-205ENST00000466780 HSCBQ8IWL3 235 aa16.37■□□□□ 0.21
PDZRN3-205ENST00000466780 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
PDZRN3-205ENST00000466780 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-205ENST00000466780 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
PDZRN3-205ENST00000466780 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-205ENST00000466780 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
PDZRN3-205ENST00000466780 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
PDZRN3-205ENST00000466780 NUCB1Q02818 461 aa16.35■□□□□ 0.21
PDZRN3-205ENST00000466780 IL16Q14005 1332 aa16.35■□□□□ 0.21
PDZRN3-205ENST00000466780 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
PDZRN3-205ENST00000466780 MRE11P49959 708 aa16.33■□□□□ 0.21
PDZRN3-205ENST00000466780 FRMPD1Q5SYB0 1578 aa16.33■□□□□ 0.21
PDZRN3-205ENST00000466780 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
PDZRN3-205ENST00000466780 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDZRN3-205ENST00000466780 SNX21Q969T3 373 aa16.33■□□□□ 0.2
PDZRN3-205ENST00000466780 LNPKQ9C0E8 428 aa16.33■□□□□ 0.2
PDZRN3-205ENST00000466780 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
PDZRN3-205ENST00000466780 CLCN1P35523 988 aa16.32■□□□□ 0.2
PDZRN3-205ENST00000466780 RIPK4P57078 832 aa16.32■□□□□ 0.2
PDZRN3-205ENST00000466780 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
PDZRN3-205ENST00000466780 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
PDZRN3-205ENST00000466780 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
PDZRN3-205ENST00000466780 CHD1LQ86WJ1 897 aa16.31■□□□□ 0.2
PDZRN3-205ENST00000466780 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
PDZRN3-205ENST00000466780 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 TNPO1Q92973 898 aaKnown RBP16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 FYB1O15117 783 aa16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 KIF2CQ99661 725 aa16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
PDZRN3-205ENST00000466780 ABCC3O15438 1527 aa16.29■□□□□ 0.2
PDZRN3-205ENST00000466780 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 BMP2KLQ5H9B9 411 aa16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 PIK3C2BO00750 1634 aa16.28■□□□□ 0.2
PDZRN3-205ENST00000466780 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
PDZRN3-205ENST00000466780 MED14O60244 1454 aa16.27■□□□□ 0.2
PDZRN3-205ENST00000466780 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.19
PDZRN3-205ENST00000466780 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.19
PDZRN3-205ENST00000466780 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.19
PDZRN3-205ENST00000466780 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.19
PDZRN3-205ENST00000466780 CD163L1Q9NR16 1453 aa16.27■□□□□ 0.19
PDZRN3-205ENST00000466780 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 DIAPH1O60610 1272 aaKnown RBP16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 STK26Q9P289 416 aa16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
PDZRN3-205ENST00000466780 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
PDZRN3-205ENST00000466780 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
PDZRN3-205ENST00000466780 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
PDZRN3-205ENST00000466780 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
PDZRN3-205ENST00000466780 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
PDZRN3-205ENST00000466780 IDI1Q13907 227 aa16.24■□□□□ 0.19
PDZRN3-205ENST00000466780 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
PDZRN3-205ENST00000466780 LRRC7Q96NW7 1537 aa16.23■□□□□ 0.19
PDZRN3-205ENST00000466780 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
PDZRN3-205ENST00000466780 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
PDZRN3-205ENST00000466780 PTPRMP28827 1452 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 ATAD2Q6PL18 1390 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 ESPNB1AK53 854 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
PDZRN3-205ENST00000466780 FCHSD2O94868 740 aa16.21■□□□□ 0.19
PDZRN3-205ENST00000466780 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
PDZRN3-205ENST00000466780 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
PDZRN3-205ENST00000466780 MRPL50Q8N5N7 158 aaKnown RBP16.21■□□□□ 0.19
PDZRN3-205ENST00000466780 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.19
PDZRN3-205ENST00000466780 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.18
PDZRN3-205ENST00000466780 K7ELQ4 463 aaPredicted RBP16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 VAMP4O75379 141 aa16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 NEO1Q92859 1461 aa16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
PDZRN3-205ENST00000466780 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 ZFYVE9O95405 1425 aa16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms