RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 BRWD3Q6RI45 1802 aa14.73□□□□□ -0.05
APP-213ENST00000464867 UNC5CLQ8IV45 518 aa14.72□□□□□ -0.05
APP-213ENST00000464867 DAPK1P53355 1430 aa14.72□□□□□ -0.05
APP-213ENST00000464867 ORAI2Q96SN7 254 aa14.71□□□□□ -0.05
APP-213ENST00000464867 COLQQ9Y215 455 aaPredicted RBP14.71□□□□□ -0.05
APP-213ENST00000464867 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.71□□□□□ -0.05
APP-213ENST00000464867 RALGAPBQ86X10 1494 aa14.7□□□□□ -0.06
APP-213ENST00000464867 NALCNQ8IZF0 1738 aa14.7□□□□□ -0.06
APP-213ENST00000464867 CHRM1P11229 460 aaPredicted RBP14.7□□□□□ -0.06
APP-213ENST00000464867 IFFO2Q5TF58 517 aa14.7□□□□□ -0.06
APP-213ENST00000464867 SEPT12Q8IYM1 358 aa14.7□□□□□ -0.06
APP-213ENST00000464867 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
APP-213ENST00000464867 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
APP-213ENST00000464867 MYOM2P54296 1465 aa14.69□□□□□ -0.06
APP-213ENST00000464867 PTPN23Q9H3S7 1636 aa14.68□□□□□ -0.06
APP-213ENST00000464867 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
APP-213ENST00000464867 NPHP3Q7Z494 1330 aa14.67□□□□□ -0.06
APP-213ENST00000464867 CCDC9Q9Y3X0 531 aaKnown RBP14.67□□□□□ -0.06
APP-213ENST00000464867 GLI3P10071 1580 aa14.67□□□□□ -0.06
APP-213ENST00000464867 METP08581 1390 aa14.66□□□□□ -0.06
APP-213ENST00000464867 A0A0G2JS52 829 aa14.65□□□□□ -0.06
APP-213ENST00000464867 MYT1Q01538 1121 aa14.65□□□□□ -0.06
APP-213ENST00000464867 KANK4Q5T7N3 995 aaPredicted RBP14.65□□□□□ -0.06
APP-213ENST00000464867 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
APP-213ENST00000464867 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
APP-213ENST00000464867 IER5LQ5T953 404 aa14.64□□□□□ -0.07
APP-213ENST00000464867 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
APP-213ENST00000464867 EN1Q05925 392 aaPredicted RBP14.63□□□□□ -0.07
APP-213ENST00000464867 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
APP-213ENST00000464867 LRPPRCP42704 1394 aaKnown RBP14.62□□□□□ -0.07
APP-213ENST00000464867 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
APP-213ENST00000464867 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
APP-213ENST00000464867 SLIT2O94813 1529 aa14.61□□□□□ -0.07
APP-213ENST00000464867 ONECUT3O60422 494 aaPredicted RBP14.61□□□□□ -0.07
APP-213ENST00000464867 SEC24BO95487 1268 aa14.61□□□□□ -0.07
APP-213ENST00000464867 VPS72Q15906 364 aa14.61□□□□□ -0.07
APP-213ENST00000464867 IQGAP3Q86VI3 1631 aa14.6□□□□□ -0.07
APP-213ENST00000464867 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
APP-213ENST00000464867 FOXO3O43524 673 aa14.6□□□□□ -0.07
APP-213ENST00000464867 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
APP-213ENST00000464867 E9PCH4 1651 aa14.6□□□□□ -0.07
APP-213ENST00000464867 RGPD1P0DJD0 1748 aa14.59□□□□□ -0.07
APP-213ENST00000464867 XPCQ01831 940 aaPredicted RBP14.59□□□□□ -0.07
APP-213ENST00000464867 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
APP-213ENST00000464867 PXDNQ92626 1479 aa14.57□□□□□ -0.08
APP-213ENST00000464867 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
APP-213ENST00000464867 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
APP-213ENST00000464867 USP32Q8NFA0 1604 aa14.54□□□□□ -0.08
APP-213ENST00000464867 NWD2Q9ULI1 1742 aa14.54□□□□□ -0.08
APP-213ENST00000464867 ROBO2Q9HCK4 1378 aa14.53□□□□□ -0.08
APP-213ENST00000464867 PSEN1P49768 467 aa14.53□□□□□ -0.08
APP-213ENST00000464867 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
APP-213ENST00000464867 HFM1A2PYH4 1435 aa14.52□□□□□ -0.08
APP-213ENST00000464867 EZH2Q15910 746 aaKnown RBP14.52□□□□□ -0.09
APP-213ENST00000464867 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.09
APP-213ENST00000464867 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.09
APP-213ENST00000464867 NBPF14Q5TI25 921 aa14.52□□□□□ -0.09
APP-213ENST00000464867 DISP2A7MBM2 1401 aa14.51□□□□□ -0.09
APP-213ENST00000464867 SPATA31A3Q5VYP0 1347 aa14.51□□□□□ -0.09
APP-213ENST00000464867 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
APP-213ENST00000464867 PLCH1Q4KWH8 1693 aa14.51□□□□□ -0.09
APP-213ENST00000464867 NINLQ9Y2I6 1382 aa14.5□□□□□ -0.09
APP-213ENST00000464867 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
APP-213ENST00000464867 ADGRB2O60241 1585 aa14.49□□□□□ -0.09
APP-213ENST00000464867 PLCG2P16885 1265 aa14.49□□□□□ -0.09
APP-213ENST00000464867 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
APP-213ENST00000464867 SCUBE2Q9NQ36 999 aa14.49□□□□□ -0.09
APP-213ENST00000464867 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
APP-213ENST00000464867 CDC42BPGQ6DT37 1551 aa14.48□□□□□ -0.09
APP-213ENST00000464867 C1QTNF8P60827 252 aa14.48□□□□□ -0.09
APP-213ENST00000464867 PSME1Q06323 249 aa14.48□□□□□ -0.09
APP-213ENST00000464867 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
APP-213ENST00000464867 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
APP-213ENST00000464867 CCDC144AA2RUR9 1427 aa14.48□□□□□ -0.09
APP-213ENST00000464867 NUP155O75694 1391 aa14.47□□□□□ -0.09
APP-213ENST00000464867 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
APP-213ENST00000464867 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
APP-213ENST00000464867 KRT28Q7Z3Y7 464 aa14.47□□□□□ -0.09
APP-213ENST00000464867 CAMKK2Q96RR4 588 aa14.47□□□□□ -0.09
APP-213ENST00000464867 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.09
APP-213ENST00000464867 KCNQ2O43526 872 aa14.46□□□□□ -0.09
APP-213ENST00000464867 APBA3O96018 575 aa14.46□□□□□ -0.09
APP-213ENST00000464867 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
APP-213ENST00000464867 CABLES1Q8TDN4 633 aa14.46□□□□□ -0.09
APP-213ENST00000464867 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.1
APP-213ENST00000464867 TRIM37O94972 964 aa14.45□□□□□ -0.1
APP-213ENST00000464867 FAM196AQ6ZSG2 479 aa14.45□□□□□ -0.1
APP-213ENST00000464867 OCEL1Q9H607 264 aa14.45□□□□□ -0.1
APP-213ENST00000464867 PRAG1Q86YV5 1406 aa14.44□□□□□ -0.1
APP-213ENST00000464867 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
APP-213ENST00000464867 KIF1AQ12756 1690 aa14.44□□□□□ -0.1
APP-213ENST00000464867 BTG4Q9NY30 223 aa14.43□□□□□ -0.1
APP-213ENST00000464867 KIF1BO60333 1816 aa14.43□□□□□ -0.1
APP-213ENST00000464867 NAIPQ13075 1403 aa14.41□□□□□ -0.1
APP-213ENST00000464867 TNS3Q68CZ2 1445 aa14.41□□□□□ -0.1
APP-213ENST00000464867 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
APP-213ENST00000464867 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
APP-213ENST00000464867 CAMTA1Q9Y6Y1 1673 aa14.41□□□□□ -0.1
APP-213ENST00000464867 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
APP-213ENST00000464867 CHD4Q14839 1912 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms