RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 FBXO41Q8TF61 875 aa6.79□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 TBX22Q9Y458 520 aa6.79□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 MAP2K5Q13163 448 aa6.78□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 NRXN3Q9Y4C0 1643 aa6.78□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PRAG1Q86YV5 1406 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 LRRC7Q96NW7 1537 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 IRF6O14896 467 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 KCNA6P17658 529 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 STRCP1A6NGW2 1772 aa6.77□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 ZNF326Q5BKZ1 582 aaKnown RBP6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PCMTD1Q96MG8 357 aaPredicted RBP6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 MYOM2P54296 1465 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PPLO60437 1756 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CHD2O14647 1828 aaKnown RBP6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 NRXN1Q9ULB1 1477 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 RAD21O60216 631 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PDIA6Q15084 440 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 STAC3Q96MF2 364 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 TSPYL2Q9H2G4 693 aaPredicted RBP6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CCDC61Q9Y6R9 512 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 XRN1Q8IZH2 1706 aaKnown RBP6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PIK3C2GO75747 1445 aa6.75□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 SETD1AO15047 1707 aaKnown RBP6.74□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 RBM42Q9BTD8 480 aaKnown RBP6.74□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CABP2Q9NPB3 220 aa6.74□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 TMEM94Q12767 1356 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 ALKQ9UM73 1620 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 MCM6Q14566 821 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 NUTM2DQ5VT03 806 aaPredicted RBP6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PROSER2Q86WR7 435 aaPredicted RBP6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 REM2Q8IYK8 340 aaPredicted RBP6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CCDC102AQ96A19 550 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PTCH1Q13635 1447 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PTPRUQ92729 1446 aa6.73□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 METP08581 1390 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 XIRP1Q702N8 1843 aaKnown RBP6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 PDE4CQ08493 712 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 MS4A4AQ96JQ5 239 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 GPHNQ9NQX3 736 aaPredicted RBP6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 TECPR2O15040 1411 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 ADGRF5Q8IZF2 1346 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 LAMC1P11047 1609 aa6.72□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 DHX57Q6P158 1386 aaKnown RBP6.71□□□□□ -1.33
RNU6ATAC28P-201ENST00000459249 DCCP43146 1447 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 UBAP1LF5GYI3 381 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 TOM1O60784 492 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 TMCO4Q5TGY1 634 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ASXL1Q8IXJ9 1541 aa6.71□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 MSH6P52701 1360 aa6.7□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 PPP1R15BQ5SWA1 713 aa6.7□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 IFNL1Q8IU54 200 aa6.7□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 LRPPRCP42704 1394 aaKnown RBP6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ABCC11Q96J66 1382 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 FAM135BQ49AJ0 1406 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ADGRL3Q9HAR2 1447 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 PATL2C9JE40 543 aaKnown RBP6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 GNPATO15228 680 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 KNDC1Q76NI1 1749 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 DPYSL4O14531 572 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 HIC1Q14526 733 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 SIRT1Q96EB6 747 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 C19orf44Q9H6X5 657 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 EMILIN3Q9NT22 766 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 MTMR7Q9Y216 660 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ADGRB1O14514 1584 aa6.68□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 YTHDC2Q9H6S0 1430 aaKnown RBP6.67□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 DLC1Q96QB1 1528 aa6.67□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 PLSCR2Q9NRY7 297 aa6.67□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 KIAA1210Q9ULL0 1709 aa6.67□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 MFAP1P55081 439 aaKnown RBP6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 SKIV2LQ15477 1246 aaKnown RBP6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 CFAP70Q5T0N1 1121 aa6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 NALCNQ8IZF0 1738 aa6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 CLSPNQ9HAW4 1339 aa6.66□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 CDC42BPGQ6DT37 1551 aa6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 FCHSD2O94868 740 aa6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 ATF3P18847 181 aa6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 TMEM132EQ6IEE7 984 aa6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 OXER1Q8TDS5 423 aa6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 RBM33Q96EV2 1170 aaKnown RBP6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
RNU6ATAC28P-201ENST00000459249 FARP1Q9Y4F1 1045 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms