RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 GLI2P10070 1586 aa24.71■■□□□ 1.55
CNEP1R1-203ENST00000458059 DIAPH1O60610 1272 aaKnown RBP24.71■■□□□ 1.55
CNEP1R1-203ENST00000458059 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
CNEP1R1-203ENST00000458059 PRKAR2BP31323 418 aa24.69■■□□□ 1.54
CNEP1R1-203ENST00000458059 PANK2Q9BZ23 570 aa24.69■■□□□ 1.54
CNEP1R1-203ENST00000458059 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
CNEP1R1-203ENST00000458059 AAMPQ13685 434 aa24.68■■□□□ 1.54
CNEP1R1-203ENST00000458059 ZC3H13Q5T200 1668 aaKnown RBP24.68■■□□□ 1.54
CNEP1R1-203ENST00000458059 FBXO31Q5XUX0 539 aaPredicted RBP24.68■■□□□ 1.54
CNEP1R1-203ENST00000458059 MCM4P33991 863 aa24.67■■□□□ 1.54
CNEP1R1-203ENST00000458059 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
CNEP1R1-203ENST00000458059 NEURL4Q96JN8 1562 aa24.67■■□□□ 1.54
CNEP1R1-203ENST00000458059 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
CNEP1R1-203ENST00000458059 ANKRD45Q5TZF3 282 aa24.66■■□□□ 1.54
CNEP1R1-203ENST00000458059 HSCBQ8IWL3 235 aa24.66■■□□□ 1.54
CNEP1R1-203ENST00000458059 ZBTB40Q9NUA8 1239 aa24.66■■□□□ 1.54
CNEP1R1-203ENST00000458059 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
CNEP1R1-203ENST00000458059 PHACTR3Q96KR7 559 aa24.65■■□□□ 1.54
CNEP1R1-203ENST00000458059 CDK19Q9BWU1 502 aa24.65■■□□□ 1.54
CNEP1R1-203ENST00000458059 HDAC1Q13547 482 aaPredicted RBP24.64■■□□□ 1.54
CNEP1R1-203ENST00000458059 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
CNEP1R1-203ENST00000458059 TSPYL6Q8N831 410 aa24.64■■□□□ 1.54
CNEP1R1-203ENST00000458059 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
CNEP1R1-203ENST00000458059 ABCC11Q96J66 1382 aa24.64■■□□□ 1.53
CNEP1R1-203ENST00000458059 POGZQ7Z3K3 1410 aa24.63■■□□□ 1.53
CNEP1R1-203ENST00000458059 RRAGDQ9NQL2 400 aaPredicted RBP24.63■■□□□ 1.53
CNEP1R1-203ENST00000458059 LMTK2Q8IWU2 1503 aa24.63■■□□□ 1.53
CNEP1R1-203ENST00000458059 ABCC3O15438 1527 aa24.62■■□□□ 1.53
CNEP1R1-203ENST00000458059 SMC5Q8IY18 1101 aa24.62■■□□□ 1.53
CNEP1R1-203ENST00000458059 HDGFL2Q7Z4V5 671 aaPredicted RBP24.62■■□□□ 1.53
CNEP1R1-203ENST00000458059 NSD2O96028 1365 aa24.62■■□□□ 1.53
CNEP1R1-203ENST00000458059 XRCC6P12956 609 aaKnown RBP eCLIP24.61■■□□□ 1.53
CNEP1R1-203ENST00000458059 CHMP5Q9NZZ3 219 aa24.61■■□□□ 1.53
CNEP1R1-203ENST00000458059 ZRANB1Q9UGI0 708 aa24.61■■□□□ 1.53
CNEP1R1-203ENST00000458059 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
CNEP1R1-203ENST00000458059 TRAK2O60296 914 aa24.61■■□□□ 1.53
CNEP1R1-203ENST00000458059 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
CNEP1R1-203ENST00000458059 SIGLEC1Q9BZZ2 1709 aa24.6■■□□□ 1.53
CNEP1R1-203ENST00000458059 IPO8O15397 1037 aaKnown RBP24.6■■□□□ 1.53
CNEP1R1-203ENST00000458059 PRKCSHP14314 528 aaPredicted RBP24.6■■□□□ 1.53
CNEP1R1-203ENST00000458059 EMILIN1Q9Y6C2 1016 aa24.6■■□□□ 1.53
CNEP1R1-203ENST00000458059 HSP90AA1P07900 732 aaKnown RBP24.59■■□□□ 1.53
CNEP1R1-203ENST00000458059 CHD1LQ86WJ1 897 aa24.59■■□□□ 1.53
CNEP1R1-203ENST00000458059 FAM43AQ8N2R8 423 aa24.59■■□□□ 1.53
CNEP1R1-203ENST00000458059 RBM42Q9BTD8 480 aaKnown RBP24.59■■□□□ 1.53
CNEP1R1-203ENST00000458059 KIF16BQ96L93 1317 aa24.58■■□□□ 1.53
CNEP1R1-203ENST00000458059 CT47B1P0C2W7 299 aaPredicted RBP24.57■■□□□ 1.52
CNEP1R1-203ENST00000458059 DCTN1Q14203 1278 aa24.57■■□□□ 1.52
CNEP1R1-203ENST00000458059 L1TD1Q5T7N2 865 aaKnown RBP24.57■■□□□ 1.52
CNEP1R1-203ENST00000458059 HSP90AB1P08238 724 aaKnown RBP24.57■■□□□ 1.52
CNEP1R1-203ENST00000458059 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
CNEP1R1-203ENST00000458059 FAM83GA6ND36 823 aa24.56■■□□□ 1.52
CNEP1R1-203ENST00000458059 NUCB1Q02818 461 aa24.56■■□□□ 1.52
CNEP1R1-203ENST00000458059 NEXMIFQ5QGS0 1516 aa24.56■■□□□ 1.52
CNEP1R1-203ENST00000458059 APBB1O00213 710 aa24.56■■□□□ 1.52
CNEP1R1-203ENST00000458059 ADGRB2O60241 1585 aa24.56■■□□□ 1.52
CNEP1R1-203ENST00000458059 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
CNEP1R1-203ENST00000458059 CD2BP2O95400 341 aaKnown RBP24.55■■□□□ 1.52
CNEP1R1-203ENST00000458059 POLKQ9UBT6 870 aa24.55■■□□□ 1.52
CNEP1R1-203ENST00000458059 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
CNEP1R1-203ENST00000458059 COL3A1P02461 1466 aaPredicted RBP24.53■■□□□ 1.52
CNEP1R1-203ENST00000458059 MLECQ14165 292 aa24.53■■□□□ 1.52
CNEP1R1-203ENST00000458059 RSPH6AQ9H0K4 717 aa24.53■■□□□ 1.52
CNEP1R1-203ENST00000458059 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
CNEP1R1-203ENST00000458059 RRS1Q15050 365 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-203ENST00000458059 NME9Q86XW9 330 aa24.52■■□□□ 1.52
CNEP1R1-203ENST00000458059 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
CNEP1R1-203ENST00000458059 PUS7Q96PZ0 661 aaKnown RBP24.5■■□□□ 1.51
CNEP1R1-203ENST00000458059 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
CNEP1R1-203ENST00000458059 CD163L1Q9NR16 1453 aa24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 VAMP4O75379 141 aa24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 FCHSD2O94868 740 aa24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 YTHDC2Q9H6S0 1430 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 ZBTB7BO15156 539 aaPredicted RBP24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 TNPO1Q92973 898 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 MBIPQ9NS73 344 aa24.49■■□□□ 1.51
CNEP1R1-203ENST00000458059 SOX12O15370 315 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 IL16Q14005 1332 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 SIRT2Q8IXJ6 389 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 C8orf58Q8NAV2 365 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 KRT24Q2M2I5 525 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 ZNF692Q9BU19 519 aaPredicted RBP24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
CNEP1R1-203ENST00000458059 PPIP5K1Q6PFW1 1433 aa24.47■■□□□ 1.51
CNEP1R1-203ENST00000458059 TBC1D9Q6ZT07 1266 aa24.47■■□□□ 1.51
CNEP1R1-203ENST00000458059 ZMYM3Q14202 1370 aa24.47■■□□□ 1.51
CNEP1R1-203ENST00000458059 NUTM2FA1L443 756 aa24.47■■□□□ 1.51
CNEP1R1-203ENST00000458059 MRPL50Q8N5N7 158 aaKnown RBP24.46■■□□□ 1.51
CNEP1R1-203ENST00000458059 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
CNEP1R1-203ENST00000458059 LRRC7Q96NW7 1537 aa24.46■■□□□ 1.51
CNEP1R1-203ENST00000458059 PTPRMP28827 1452 aa24.46■■□□□ 1.51
CNEP1R1-203ENST00000458059 TWISTNBQ3B726 338 aaPredicted RBP24.45■■□□□ 1.51
CNEP1R1-203ENST00000458059 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.51
CNEP1R1-203ENST00000458059 ALDH1L2Q3SY69 923 aa24.45■■□□□ 1.5
CNEP1R1-203ENST00000458059 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
CNEP1R1-203ENST00000458059 C16orf71Q8IYS4 520 aaPredicted RBP24.44■■□□□ 1.5
CNEP1R1-203ENST00000458059 FSD2A1L4K1 749 aa24.42■■□□□ 1.5
CNEP1R1-203ENST00000458059 KIF2CQ99661 725 aa24.42■■□□□ 1.5
CNEP1R1-203ENST00000458059 RBM25P49756 843 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms