RNA–Protein interactions for RNA: ENST00000449901.6

PKM-204, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2 BASIC

Gene PKM, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-204ENST00000449901 IQSEC2Q5JU85 1478 aa29.97■■■□□ 2.39
PKM-204ENST00000449901 VGFO15240 615 aaPredicted RBP29.96■■■□□ 2.39
PKM-204ENST00000449901 ADGRB1O14514 1584 aa29.95■■■□□ 2.39
PKM-204ENST00000449901 MRE11P49959 708 aa29.95■■■□□ 2.39
PKM-204ENST00000449901 WDR63Q8IWG1 891 aa29.95■■■□□ 2.39
PKM-204ENST00000449901 TNNT2P45379 298 aaPredicted RBP29.94■■■□□ 2.38
PKM-204ENST00000449901 ZNF692Q9BU19 519 aaPredicted RBP29.94■■■□□ 2.38
PKM-204ENST00000449901 MVPQ14764 893 aaKnown RBP29.93■■■□□ 2.38
PKM-204ENST00000449901 TMEM132EQ6IEE7 984 aa29.92■■■□□ 2.38
PKM-204ENST00000449901 ZFYVE9O95405 1425 aa29.91■■■□□ 2.38
PKM-204ENST00000449901 ESF1Q9H501 851 aaKnown RBP29.91■■■□□ 2.38
PKM-204ENST00000449901 GRPEL1Q9HAV7 217 aa29.9■■■□□ 2.38
PKM-204ENST00000449901 MORC1Q86VD1 984 aa29.9■■■□□ 2.38
PKM-204ENST00000449901 MYO3AQ8NEV4 1616 aa29.88■■■□□ 2.37
PKM-204ENST00000449901 SLC24A1O60721 1099 aa29.87■■■□□ 2.37
PKM-204ENST00000449901 TRAK1Q9UPV9 953 aa29.87■■■□□ 2.37
PKM-204ENST00000449901 NSD3Q9BZ95 1437 aa29.86■■■□□ 2.37
PKM-204ENST00000449901 ERBB4Q15303 1308 aa29.86■■■□□ 2.37
PKM-204ENST00000449901 DNAJC5Q9H3Z4 198 aa29.86■■■□□ 2.37
PKM-204ENST00000449901 SENP3Q9H4L4 574 aaPredicted RBP29.86■■■□□ 2.37
PKM-204ENST00000449901 MYH16Q9H6N6 1097 aa29.86■■■□□ 2.37
PKM-204ENST00000449901 STAG3Q9UJ98 1225 aa29.85■■■□□ 2.37
PKM-204ENST00000449901 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
PKM-204ENST00000449901 HSP90AA1P07900 732 aaKnown RBP29.85■■■□□ 2.37
PKM-204ENST00000449901 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
PKM-204ENST00000449901 ZKSCAN2Q63HK3 967 aa29.85■■■□□ 2.37
PKM-204ENST00000449901 DDX11L8A8MPP1 907 aa29.84■■■□□ 2.37
PKM-204ENST00000449901 HSCBQ8IWL3 235 aa29.84■■■□□ 2.37
PKM-204ENST00000449901 DZIP1LQ8IYY4 767 aaKnown RBP29.84■■■□□ 2.37
PKM-204ENST00000449901 DDIT3P35638 169 aa29.84■■■□□ 2.37
PKM-204ENST00000449901 NCOA3Q9Y6Q9 1424 aa29.82■■■□□ 2.36
PKM-204ENST00000449901 ESPNB1AK53 854 aa29.82■■■□□ 2.36
PKM-204ENST00000449901 HSP90AA2PQ14568 343 aaPredicted RBP29.82■■■□□ 2.36
PKM-204ENST00000449901 GLIPR1L2Q4G1C9 344 aa29.82■■■□□ 2.36
PKM-204ENST00000449901 FTSJ3Q8IY81 847 aaKnown RBP29.82■■■□□ 2.36
PKM-204ENST00000449901 MTHFSP49914 203 aa29.8■■■□□ 2.36
PKM-204ENST00000449901 SLC12A5Q9H2X9 1139 aa29.79■■■□□ 2.36
PKM-204ENST00000449901 HDAC1Q13547 482 aaPredicted RBP29.79■■■□□ 2.36
PKM-204ENST00000449901 RRP9O43818 475 aaKnown RBP29.78■■■□□ 2.36
PKM-204ENST00000449901 GAS2L3Q86XJ1 694 aa29.78■■■□□ 2.36
PKM-204ENST00000449901 SBNO2Q9Y2G9 1366 aa29.78■■■□□ 2.36
PKM-204ENST00000449901 TNPO1Q92973 898 aaKnown RBP29.76■■■□□ 2.35
PKM-204ENST00000449901 PKNOX2Q96KN3 472 aa29.76■■■□□ 2.35
PKM-204ENST00000449901 ISY1Q9ULR0 285 aaKnown RBP29.76■■■□□ 2.35
PKM-204ENST00000449901 QRICH2Q9H0J4 1663 aa29.76■■■□□ 2.35
PKM-204ENST00000449901 TSR2Q969E8 191 aaKnown RBP29.76■■■□□ 2.35
PKM-204ENST00000449901 TRIM27P14373 513 aa29.75■■■□□ 2.35
PKM-204ENST00000449901 TNRQ92752 1358 aa29.75■■■□□ 2.35
PKM-204ENST00000449901 VSIG10Q8N0Z9 540 aa29.75■■■□□ 2.35
PKM-204ENST00000449901 SMC5Q8IY18 1101 aa29.74■■■□□ 2.35
PKM-204ENST00000449901 ARHGEF28Q8N1W1 1705 aaKnown RBP29.74■■■□□ 2.35
PKM-204ENST00000449901 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
PKM-204ENST00000449901 RBM25P49756 843 aaKnown RBP29.73■■■□□ 2.35
PKM-204ENST00000449901 SMC4Q9NTJ3 1288 aa29.73■■■□□ 2.35
PKM-204ENST00000449901 SNX21Q969T3 373 aa29.72■■■□□ 2.35
PKM-204ENST00000449901 ITPRIPQ8IWB1 547 aa29.72■■■□□ 2.35
PKM-204ENST00000449901 ALKQ9UM73 1620 aa29.71■■■□□ 2.35
PKM-204ENST00000449901 EXOSC9Q06265 439 aaKnown RBP29.7■■■□□ 2.35
PKM-204ENST00000449901 CEBPAP49715 358 aaPredicted RBP29.7■■■□□ 2.34
PKM-204ENST00000449901 DDX19BQ9UMR2 479 aa29.7■■■□□ 2.34
PKM-204ENST00000449901 SSH1Q8WYL5 1049 aa29.69■■■□□ 2.34
PKM-204ENST00000449901 CFAP53Q96M91 514 aa29.69■■■□□ 2.34
PKM-204ENST00000449901 U2AF1L5P0DN76 240 aaPredicted RBP29.69■■■□□ 2.34
PKM-204ENST00000449901 U2AF1Q01081 240 aaKnown RBP eCLIP29.69■■■□□ 2.342e-6■□□□□ 9
PKM-204ENST00000449901 ZMYND15Q9H091 742 aa29.69■■■□□ 2.34
PKM-204ENST00000449901 NCBP3Q53F19 620 aaKnown RBP29.68■■■□□ 2.34
PKM-204ENST00000449901 STK26Q9P289 416 aa29.68■■■□□ 2.34
PKM-204ENST00000449901 RAB3GAP1Q15042 981 aa29.67■■■□□ 2.34
PKM-204ENST00000449901 TRIM44Q96DX7 344 aaPredicted RBP29.67■■■□□ 2.34
PKM-204ENST00000449901 ADGRB2O60241 1585 aa29.66■■■□□ 2.34
PKM-204ENST00000449901 CT47B1P0C2W7 299 aaPredicted RBP29.66■■■□□ 2.34
PKM-204ENST00000449901 ATF7IPQ6VMQ6 1270 aa29.66■■■□□ 2.34
PKM-204ENST00000449901 CIZ1Q9ULV3 898 aaPredicted RBP29.65■■■□□ 2.34
PKM-204ENST00000449901 HSP90AB1P08238 724 aaKnown RBP29.64■■■□□ 2.34
PKM-204ENST00000449901 TMEM57Q8N5G2 664 aa29.64■■■□□ 2.34
PKM-204ENST00000449901 NOB1Q9ULX3 412 aaKnown RBP29.64■■■□□ 2.34
PKM-204ENST00000449901 PTPRMP28827 1452 aa29.64■■■□□ 2.33
PKM-204ENST00000449901 FER1L4A9Z1Z3 1794 aa29.64■■■□□ 2.33
PKM-204ENST00000449901 GBP4Q96PP9 640 aa29.64■■■□□ 2.33
PKM-204ENST00000449901 C3P01024 1663 aa29.63■■■□□ 2.33
PKM-204ENST00000449901 YTHDC2Q9H6S0 1430 aaKnown RBP29.63■■■□□ 2.33
PKM-204ENST00000449901 ZBTB40Q9NUA8 1239 aa29.63■■■□□ 2.33
PKM-204ENST00000449901 UBR1Q8IWV7 1749 aa29.63■■■□□ 2.33
PKM-204ENST00000449901 KIF2CQ99661 725 aa29.63■■■□□ 2.33
PKM-204ENST00000449901 USP32Q8NFA0 1604 aa29.62■■■□□ 2.33
PKM-204ENST00000449901 NUCB1Q02818 461 aa29.62■■■□□ 2.33
PKM-204ENST00000449901 LNPKQ9C0E8 428 aa29.62■■■□□ 2.33
PKM-204ENST00000449901 CD2BP2O95400 341 aaKnown RBP29.61■■■□□ 2.33
PKM-204ENST00000449901 SETD1AO15047 1707 aaKnown RBP29.6■■■□□ 2.33
PKM-204ENST00000449901 FOXD4L1Q9NU39 408 aa29.6■■■□□ 2.33
PKM-204ENST00000449901 SAFB2Q14151 953 aaKnown RBP eCLIP29.6■■■□□ 2.33
PKM-204ENST00000449901 SKOR2Q2VWA4 1001 aaPredicted RBP29.6■■■□□ 2.33
PKM-204ENST00000449901 TULP4Q9NRJ4 1543 aa29.59■■■□□ 2.33
PKM-204ENST00000449901 NRXN3Q9Y4C0 1643 aa29.59■■■□□ 2.33
PKM-204ENST00000449901 TRIM35Q9UPQ4 493 aa29.58■■■□□ 2.33
PKM-204ENST00000449901 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.57■■■□□ 2.32
PKM-204ENST00000449901 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
PKM-204ENST00000449901 TMEM2Q9UHN6 1383 aa29.55■■■□□ 2.32
PKM-204ENST00000449901 TMPOP42166 694 aaKnown RBP29.55■■■□□ 2.32
PKM-204ENST00000449901 CHD1LQ86WJ1 897 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms