RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RAPGEF4Q8WZA2 1011 aa14.46□□□□□ -0.1
TRAPPC9-202ENST00000438773 PLA2R1Q13018 1463 aa14.46□□□□□ -0.1
TRAPPC9-202ENST00000438773 NPHP1O15259 732 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 MFAP1P55081 439 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 GAS2L2Q8NHY3 880 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 EVA1CP58658 441 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 NSD2O96028 1365 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 NFKBIBQ15653 356 aa14.45□□□□□ -0.1
TRAPPC9-202ENST00000438773 MLH3Q9UHC1 1453 aa14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 FKBP5Q13451 457 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 TWISTNBQ3B726 338 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-202ENST00000438773 NFE2L2Q16236 605 aa14.43□□□□□ -0.1
TRAPPC9-202ENST00000438773 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
TRAPPC9-202ENST00000438773 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
TRAPPC9-202ENST00000438773 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
TRAPPC9-202ENST00000438773 ACEP12821 1306 aa14.42□□□□□ -0.1
TRAPPC9-202ENST00000438773 SHROOM2Q13796 1616 aa14.42□□□□□ -0.1
TRAPPC9-202ENST00000438773 YTHDC2Q9H6S0 1430 aaKnown RBP14.42□□□□□ -0.1
TRAPPC9-202ENST00000438773 KCNJ4P48050 445 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 PHF8Q9UPP1 1060 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 FOXO3O43524 673 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 HDAC5Q9UQL6 1122 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 GSE1Q14687 1217 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 NOB1Q9ULX3 412 aaKnown RBP14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 AAMPQ13685 434 aa14.41□□□□□ -0.1
TRAPPC9-202ENST00000438773 CT47B1P0C2W7 299 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC9-202ENST00000438773 UGGT1Q9NYU2 1555 aa14.4□□□□□ -0.1
TRAPPC9-202ENST00000438773 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
TRAPPC9-202ENST00000438773 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
TRAPPC9-202ENST00000438773 CDC42BPBQ9Y5S2 1711 aa14.39□□□□□ -0.11
TRAPPC9-202ENST00000438773 CFAP74Q9C0B2 1584 aa14.39□□□□□ -0.11
TRAPPC9-202ENST00000438773 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
TRAPPC9-202ENST00000438773 LNPKQ9C0E8 428 aa14.39□□□□□ -0.11
TRAPPC9-202ENST00000438773 ATF7IPQ6VMQ6 1270 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 GOLGA6L22H0YM25 854 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 PTPRTO14522 1441 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 TRIM6-TRIM34B2RNG4 842 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
TRAPPC9-202ENST00000438773 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 PLEKHO1Q53GL0 409 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 A0A1W2PP64 1363 aa14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-202ENST00000438773 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 TRPM2O94759 1503 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 PPIP5K1Q6PFW1 1433 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 PLEKHH1Q9ULM0 1364 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 KDM2BQ8NHM5 1336 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 MCCP23508 829 aa14.36□□□□□ -0.11
TRAPPC9-202ENST00000438773 HSPA2P54652 639 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 ZNF530Q6P9A1 599 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 MCM10Q7L590 875 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 TTC21BQ7Z4L5 1316 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 E9PCH4 1651 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 C9orf78Q9NZ63 289 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 NKTRP30414 1462 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
TRAPPC9-202ENST00000438773 PIK3C2GO75747 1445 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 CCDC30Q5VVM6 783 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 CROCC2H7BZ55 1655 aa14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 PRDM15P57071 1507 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC9-202ENST00000438773 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.11
TRAPPC9-202ENST00000438773 TBX22Q9Y458 520 aa14.33□□□□□ -0.11
TRAPPC9-202ENST00000438773 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 HECW2Q9P2P5 1572 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 KCNA6P17658 529 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 DNTTIP2Q5QJE6 756 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 C1orf115Q9H7X2 142 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 HSP90AB2PQ58FF8 381 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
TRAPPC9-202ENST00000438773 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 TSPOAP1O95153 1857 aa14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 FGD1P98174 961 aa14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms