RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
TMCO3-202ENST00000434316 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
TMCO3-202ENST00000434316 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
TMCO3-202ENST00000434316 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
TMCO3-202ENST00000434316 NSD2O96028 1365 aa18.84■□□□□ 0.61
TMCO3-202ENST00000434316 HSCBQ8IWL3 235 aa18.84■□□□□ 0.61
TMCO3-202ENST00000434316 GLI2P10070 1586 aa18.83■□□□□ 0.61
TMCO3-202ENST00000434316 ZBTB40Q9NUA8 1239 aa18.82■□□□□ 0.6
TMCO3-202ENST00000434316 LNPKQ9C0E8 428 aa18.82■□□□□ 0.6
TMCO3-202ENST00000434316 A0A1W2PP64 1363 aa18.82■□□□□ 0.6
TMCO3-202ENST00000434316 RIPK4P57078 832 aa18.8■□□□□ 0.6
TMCO3-202ENST00000434316 ARHGEF28Q8N1W1 1705 aaKnown RBP18.8■□□□□ 0.6
TMCO3-202ENST00000434316 STK26Q9P289 416 aa18.8■□□□□ 0.6
TMCO3-202ENST00000434316 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
TMCO3-202ENST00000434316 RPGRIP1LQ68CZ1 1315 aa18.79■□□□□ 0.6
TMCO3-202ENST00000434316 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
TMCO3-202ENST00000434316 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
TMCO3-202ENST00000434316 NUCB1Q02818 461 aa18.78■□□□□ 0.6
TMCO3-202ENST00000434316 ABCC11Q96J66 1382 aa18.78■□□□□ 0.6
TMCO3-202ENST00000434316 DDIT3P35638 169 aa18.77■□□□□ 0.6
TMCO3-202ENST00000434316 UBE2Q2Q8WVN8 375 aa18.77■□□□□ 0.6
TMCO3-202ENST00000434316 RBM25P49756 843 aaKnown RBP18.77■□□□□ 0.59
TMCO3-202ENST00000434316 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
TMCO3-202ENST00000434316 ASXL2Q76L83 1435 aa18.76■□□□□ 0.59
TMCO3-202ENST00000434316 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
TMCO3-202ENST00000434316 FYB1O15117 783 aa18.76■□□□□ 0.59
TMCO3-202ENST00000434316 FRMPD1Q5SYB0 1578 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 IL16Q14005 1332 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 CHD1LQ86WJ1 897 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 KIF16BQ96L93 1317 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 MRE11P49959 708 aa18.75■□□□□ 0.59
TMCO3-202ENST00000434316 TNPO1Q92973 898 aaKnown RBP18.75■□□□□ 0.59
TMCO3-202ENST00000434316 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
TMCO3-202ENST00000434316 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
TMCO3-202ENST00000434316 IPO8O15397 1037 aaKnown RBP18.74■□□□□ 0.59
TMCO3-202ENST00000434316 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
TMCO3-202ENST00000434316 SNX21Q969T3 373 aa18.73■□□□□ 0.59
TMCO3-202ENST00000434316 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
TMCO3-202ENST00000434316 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
TMCO3-202ENST00000434316 CD2BP2O95400 341 aaKnown RBP18.72■□□□□ 0.59
TMCO3-202ENST00000434316 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
TMCO3-202ENST00000434316 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
TMCO3-202ENST00000434316 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
TMCO3-202ENST00000434316 KIF2CQ99661 725 aa18.72■□□□□ 0.59
TMCO3-202ENST00000434316 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
TMCO3-202ENST00000434316 ABCC3O15438 1527 aa18.72■□□□□ 0.59
TMCO3-202ENST00000434316 HECW2Q9P2P5 1572 aa18.71■□□□□ 0.59
TMCO3-202ENST00000434316 FBLN1P23142 703 aa18.71■□□□□ 0.59
TMCO3-202ENST00000434316 CLCN1P35523 988 aa18.71■□□□□ 0.59
TMCO3-202ENST00000434316 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
TMCO3-202ENST00000434316 NAP1L5Q96NT1 182 aaPredicted RBP18.71■□□□□ 0.59
TMCO3-202ENST00000434316 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
TMCO3-202ENST00000434316 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
TMCO3-202ENST00000434316 ALDH1L2Q3SY69 923 aa18.69■□□□□ 0.58
TMCO3-202ENST00000434316 BMP2KLQ5H9B9 411 aa18.69■□□□□ 0.58
TMCO3-202ENST00000434316 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
TMCO3-202ENST00000434316 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
TMCO3-202ENST00000434316 PPIP5K1Q6PFW1 1433 aa18.69■□□□□ 0.58
TMCO3-202ENST00000434316 CD163L1Q9NR16 1453 aa18.68■□□□□ 0.58
TMCO3-202ENST00000434316 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
TMCO3-202ENST00000434316 IDI1Q13907 227 aa18.68■□□□□ 0.58
TMCO3-202ENST00000434316 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
TMCO3-202ENST00000434316 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
TMCO3-202ENST00000434316 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
TMCO3-202ENST00000434316 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
TMCO3-202ENST00000434316 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
TMCO3-202ENST00000434316 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
TMCO3-202ENST00000434316 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
TMCO3-202ENST00000434316 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
TMCO3-202ENST00000434316 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
TMCO3-202ENST00000434316 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
TMCO3-202ENST00000434316 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
TMCO3-202ENST00000434316 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
TMCO3-202ENST00000434316 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 LRRC7Q96NW7 1537 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 GBP4Q96PP9 640 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 MED14O60244 1454 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 PNPLA6Q8IY17 1366 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
TMCO3-202ENST00000434316 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.57
TMCO3-202ENST00000434316 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 VAMP4O75379 141 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 HMOX1P09601 288 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.57
TMCO3-202ENST00000434316 FCHSD2O94868 740 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 PTPRMP28827 1452 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 ESPNB1AK53 854 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 K7ELQ4 463 aaPredicted RBP18.63■□□□□ 0.57
TMCO3-202ENST00000434316 SSFA2P28290 1259 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.571e-6■■□□□ 13.1
TMCO3-202ENST00000434316 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 GCC1Q96CN9 775 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
TMCO3-202ENST00000434316 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
TMCO3-202ENST00000434316 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
TMCO3-202ENST00000434316 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
TMCO3-202ENST00000434316 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms