RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
C2CD3-204ENST00000414160 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
C2CD3-204ENST00000414160 TNPO1Q92973 898 aaKnown RBP12.77□□□□□ -0.37
C2CD3-204ENST00000414160 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
C2CD3-204ENST00000414160 MYOM2P54296 1465 aa12.77□□□□□ -0.37
C2CD3-204ENST00000414160 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
C2CD3-204ENST00000414160 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
C2CD3-204ENST00000414160 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
C2CD3-204ENST00000414160 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-204ENST00000414160 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
C2CD3-204ENST00000414160 SNX21Q969T3 373 aa12.76□□□□□ -0.37
C2CD3-204ENST00000414160 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
C2CD3-204ENST00000414160 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
C2CD3-204ENST00000414160 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
C2CD3-204ENST00000414160 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-204ENST00000414160 ZBTB40Q9NUA8 1239 aa12.75□□□□□ -0.37
C2CD3-204ENST00000414160 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
C2CD3-204ENST00000414160 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
C2CD3-204ENST00000414160 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
C2CD3-204ENST00000414160 NUCB1Q02818 461 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 TET3O43151 1660 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 KIF2CQ99661 725 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
C2CD3-204ENST00000414160 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
C2CD3-204ENST00000414160 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
C2CD3-204ENST00000414160 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
C2CD3-204ENST00000414160 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
C2CD3-204ENST00000414160 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
C2CD3-204ENST00000414160 CHGAP10645 457 aaKnown RBP12.72□□□□□ -0.37
C2CD3-204ENST00000414160 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
C2CD3-204ENST00000414160 NOS1P29475 1434 aa12.72□□□□□ -0.37
C2CD3-204ENST00000414160 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.37
C2CD3-204ENST00000414160 GBP4Q96PP9 640 aa12.71□□□□□ -0.37
C2CD3-204ENST00000414160 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.38
C2CD3-204ENST00000414160 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.38
C2CD3-204ENST00000414160 TRIM44Q96DX7 344 aaPredicted RBP12.71□□□□□ -0.38
C2CD3-204ENST00000414160 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.38
C2CD3-204ENST00000414160 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
C2CD3-204ENST00000414160 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
C2CD3-204ENST00000414160 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
C2CD3-204ENST00000414160 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
C2CD3-204ENST00000414160 MROH1Q8NDA8 1641 aa12.69□□□□□ -0.38
C2CD3-204ENST00000414160 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
C2CD3-204ENST00000414160 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
C2CD3-204ENST00000414160 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
C2CD3-204ENST00000414160 ZBTB22O15209 634 aa12.68□□□□□ -0.38
C2CD3-204ENST00000414160 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
C2CD3-204ENST00000414160 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
C2CD3-204ENST00000414160 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
C2CD3-204ENST00000414160 RIPK4P57078 832 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 SSFA2P28290 1259 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
C2CD3-204ENST00000414160 IL16Q14005 1332 aa12.66□□□□□ -0.38
C2CD3-204ENST00000414160 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
C2CD3-204ENST00000414160 K7ELQ4 463 aaPredicted RBP12.66□□□□□ -0.38
C2CD3-204ENST00000414160 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
C2CD3-204ENST00000414160 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
C2CD3-204ENST00000414160 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
C2CD3-204ENST00000414160 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 NSD2O96028 1365 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 PTMSP20962 102 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
C2CD3-204ENST00000414160 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 ABCC3O15438 1527 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
C2CD3-204ENST00000414160 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
C2CD3-204ENST00000414160 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
C2CD3-204ENST00000414160 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
C2CD3-204ENST00000414160 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 NASPP49321 788 aaPredicted RBP12.63□□□□□ -0.39
C2CD3-204ENST00000414160 CCDC173Q0VFZ6 552 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 C1orf115Q9H7X2 142 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 KIF1BO60333 1816 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 TPM2P07951 284 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 GGT6Q6P531 493 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 ARHGAP31Q2M1Z3 1444 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
C2CD3-204ENST00000414160 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
C2CD3-204ENST00000414160 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
C2CD3-204ENST00000414160 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-204ENST00000414160 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
C2CD3-204ENST00000414160 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
C2CD3-204ENST00000414160 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
C2CD3-204ENST00000414160 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
C2CD3-204ENST00000414160 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
C2CD3-204ENST00000414160 DDX49Q9Y6V7 483 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms