RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
ABCA13-201ENST00000411975 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
ABCA13-201ENST00000411975 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
ABCA13-201ENST00000411975 CDK11BP21127 795 aaKnown RBP14.66□□□□□ -0.06
ABCA13-201ENST00000411975 G3BP1Q13283 466 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCA13-201ENST00000411975 TESK2Q96S53 571 aa14.66□□□□□ -0.06
ABCA13-201ENST00000411975 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
ABCA13-201ENST00000411975 WDR7Q9Y4E6 1490 aa14.66□□□□□ -0.06
ABCA13-201ENST00000411975 AMER1Q5JTC6 1135 aaPredicted RBP14.66□□□□□ -0.06
ABCA13-201ENST00000411975 RARSP54136 660 aaKnown RBP14.65□□□□□ -0.06
ABCA13-201ENST00000411975 A2MP01023 1474 aa14.65□□□□□ -0.06
ABCA13-201ENST00000411975 ZKSCAN1P17029 563 aaPredicted RBP14.65□□□□□ -0.06
ABCA13-201ENST00000411975 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
ABCA13-201ENST00000411975 PROSER2Q86WR7 435 aaPredicted RBP14.64□□□□□ -0.07
ABCA13-201ENST00000411975 KIF3AQ9Y496 699 aa14.64□□□□□ -0.07
ABCA13-201ENST00000411975 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
ABCA13-201ENST00000411975 ADGRL2O95490 1459 aa14.64□□□□□ -0.07
ABCA13-201ENST00000411975 NSD2O96028 1365 aa14.64□□□□□ -0.07
ABCA13-201ENST00000411975 PARD3Q8TEW0 1356 aa14.64□□□□□ -0.07
ABCA13-201ENST00000411975 CHAF1AQ13111 956 aaPredicted RBP14.64□□□□□ -0.07
ABCA13-201ENST00000411975 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 ATP6V1DQ9Y5K8 247 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 ZNF518AQ6AHZ1 1483 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 PHF14O94880 888 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
ABCA13-201ENST00000411975 RIC3Q7Z5B4 369 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
ABCA13-201ENST00000411975 HDGFL1Q5TGJ6 251 aa14.62□□□□□ -0.07
ABCA13-201ENST00000411975 NME9Q86XW9 330 aa14.62□□□□□ -0.07
ABCA13-201ENST00000411975 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
ABCA13-201ENST00000411975 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
ABCA13-201ENST00000411975 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
ABCA13-201ENST00000411975 ERC2O15083 957 aa14.62□□□□□ -0.07
ABCA13-201ENST00000411975 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
ABCA13-201ENST00000411975 SURF6O75683 361 aaKnown RBP14.61□□□□□ -0.07
ABCA13-201ENST00000411975 GNAI2P04899 355 aa14.61□□□□□ -0.07
ABCA13-201ENST00000411975 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
ABCA13-201ENST00000411975 FOXD4L6Q3SYB3 417 aaPredicted RBP14.61□□□□□ -0.07
ABCA13-201ENST00000411975 FOXD4L3Q6VB84 417 aaPredicted RBP14.61□□□□□ -0.07
ABCA13-201ENST00000411975 TMEM57Q8N5G2 664 aa14.61□□□□□ -0.07
ABCA13-201ENST00000411975 LRPPRCP42704 1394 aaKnown RBP14.61□□□□□ -0.07
ABCA13-201ENST00000411975 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
ABCA13-201ENST00000411975 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
ABCA13-201ENST00000411975 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
ABCA13-201ENST00000411975 NUCB2P80303 420 aa14.6□□□□□ -0.07
ABCA13-201ENST00000411975 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
ABCA13-201ENST00000411975 TEX14Q8IWB6 1497 aa14.6□□□□□ -0.07
ABCA13-201ENST00000411975 LRRFIP1Q32MZ4 808 aaKnown RBP14.6□□□□□ -0.07
ABCA13-201ENST00000411975 CLASRPQ8N2M8 674 aaKnown RBP14.59□□□□□ -0.07
ABCA13-201ENST00000411975 ASXL1Q8IXJ9 1541 aa14.59□□□□□ -0.07
ABCA13-201ENST00000411975 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
ABCA13-201ENST00000411975 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
ABCA13-201ENST00000411975 RNF20Q5VTR2 975 aa14.58□□□□□ -0.07
ABCA13-201ENST00000411975 ABCC10Q5T3U5 1492 aa14.58□□□□□ -0.08
ABCA13-201ENST00000411975 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.08
ABCA13-201ENST00000411975 EIF2AK4Q9P2K8 1649 aaKnown RBP14.58□□□□□ -0.08
ABCA13-201ENST00000411975 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
ABCA13-201ENST00000411975 FAM184AQ8NB25 1140 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 H3BQV1 296 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 IFFO2Q5TF58 517 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 CHMP4CQ96CF2 233 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 IFT57Q9NWB7 429 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 SKAP1Q86WV1 359 aa14.57□□□□□ -0.08
ABCA13-201ENST00000411975 FRAT2O75474 233 aaPredicted RBP14.56□□□□□ -0.08
ABCA13-201ENST00000411975 PER1O15534 1290 aaPredicted RBP14.56□□□□□ -0.08
ABCA13-201ENST00000411975 ANKRD36BQ8N2N9 1353 aa14.56□□□□□ -0.08
ABCA13-201ENST00000411975 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
ABCA13-201ENST00000411975 ISY1Q9ULR0 285 aaKnown RBP14.56□□□□□ -0.08
ABCA13-201ENST00000411975 DCTN1Q14203 1278 aa14.56□□□□□ -0.08
ABCA13-201ENST00000411975 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
ABCA13-201ENST00000411975 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
ABCA13-201ENST00000411975 MCM10Q7L590 875 aa14.55□□□□□ -0.08
ABCA13-201ENST00000411975 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
ABCA13-201ENST00000411975 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
ABCA13-201ENST00000411975 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
ABCA13-201ENST00000411975 TATP17735 454 aaPredicted RBP14.54□□□□□ -0.08
ABCA13-201ENST00000411975 RABEP1Q15276 862 aa14.54□□□□□ -0.08
ABCA13-201ENST00000411975 CNTROBQ8N137 903 aa14.54□□□□□ -0.08
ABCA13-201ENST00000411975 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
ABCA13-201ENST00000411975 CCDC34Q96HJ3 373 aa14.53□□□□□ -0.08
ABCA13-201ENST00000411975 SMC3Q9UQE7 1217 aa14.53□□□□□ -0.08
ABCA13-201ENST00000411975 FYB1O15117 783 aa14.53□□□□□ -0.08
ABCA13-201ENST00000411975 LRRCC1Q9C099 1032 aa14.53□□□□□ -0.08
ABCA13-201ENST00000411975 GNAT3A8MTJ3 354 aa14.52□□□□□ -0.08
ABCA13-201ENST00000411975 TRIM27P14373 513 aa14.52□□□□□ -0.08
ABCA13-201ENST00000411975 NEK4P51957 841 aa14.52□□□□□ -0.08
ABCA13-201ENST00000411975 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.09
ABCA13-201ENST00000411975 COL17A1Q9UMD9 1497 aaPredicted RBP14.52□□□□□ -0.09
ABCA13-201ENST00000411975 NEUROD6Q96NK8 337 aa14.52□□□□□ -0.09
ABCA13-201ENST00000411975 MIS18AQ9NYP9 233 aa14.51□□□□□ -0.09
ABCA13-201ENST00000411975 MCTP1Q6DN14 999 aa14.51□□□□□ -0.09
ABCA13-201ENST00000411975 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
ABCA13-201ENST00000411975 TPM4P67936 248 aa14.51□□□□□ -0.09
ABCA13-201ENST00000411975 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
ABCA13-201ENST00000411975 CPLX2Q6PUV4 134 aaKnown RBP14.51□□□□□ -0.09
ABCA13-201ENST00000411975 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
ABCA13-201ENST00000411975 VPS37CA5D8V6 355 aaPredicted RBP14.5□□□□□ -0.09
ABCA13-201ENST00000411975 ERC1Q8IUD2 1116 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms