RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
APOB-202ENST00000399256 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.41
APOB-202ENST00000399256 AGLP35573 1532 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 ESPNB1AK53 854 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
APOB-202ENST00000399256 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
APOB-202ENST00000399256 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
APOB-202ENST00000399256 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 DDIT3P35638 169 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 GLIPR1L2Q4G1C9 344 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 GAS2L3Q86XJ1 694 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 NOS1P29475 1434 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 MROH2AA6NES4 1674 aa17.54■□□□□ 0.4
APOB-202ENST00000399256 TRIM44Q96DX7 344 aaPredicted RBP17.54■□□□□ 0.4
APOB-202ENST00000399256 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
APOB-202ENST00000399256 NPATQ14207 1427 aa17.53■□□□□ 0.4
APOB-202ENST00000399256 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
APOB-202ENST00000399256 KIF1BO60333 1816 aa17.53■□□□□ 0.4
APOB-202ENST00000399256 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
APOB-202ENST00000399256 SNX21Q969T3 373 aa17.52■□□□□ 0.4
APOB-202ENST00000399256 VSIG10Q8N0Z9 540 aa17.52■□□□□ 0.39
APOB-202ENST00000399256 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.39
APOB-202ENST00000399256 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.39
APOB-202ENST00000399256 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 NUCB1Q02818 461 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 TMPOP42166 694 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
APOB-202ENST00000399256 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 PKNOX2Q96KN3 472 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
APOB-202ENST00000399256 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
APOB-202ENST00000399256 PLEKHF1Q96S99 279 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 KIF2CQ99661 725 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.39
APOB-202ENST00000399256 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
APOB-202ENST00000399256 SETBP1Q9Y6X0 1596 aa17.46■□□□□ 0.39
APOB-202ENST00000399256 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
APOB-202ENST00000399256 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 SSFA2P28290 1259 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 RIPK4P57078 832 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
APOB-202ENST00000399256 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 NUTM2DQ5VT03 806 aaPredicted RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
APOB-202ENST00000399256 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 NSD2O96028 1365 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
APOB-202ENST00000399256 NASPP49321 788 aaPredicted RBP17.41■□□□□ 0.38
APOB-202ENST00000399256 MLECQ14165 292 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 PTMSP20962 102 aa17.4■□□□□ 0.38
APOB-202ENST00000399256 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
APOB-202ENST00000399256 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 IL16Q14005 1332 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
APOB-202ENST00000399256 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 TPM2P07951 284 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
APOB-202ENST00000399256 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms