RNA–Protein interactions for RNA: ENST00000382998.8

CTIF-202, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 1 (best) BASIC

Gene CTIF, Length 4,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-202ENST00000382998 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
CTIF-202ENST00000382998 NLRP13Q86W25 1043 aa16.61■□□□□ 0.25
CTIF-202ENST00000382998 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
CTIF-202ENST00000382998 COG3Q96JB2 828 aa16.61■□□□□ 0.25
CTIF-202ENST00000382998 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
CTIF-202ENST00000382998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTIF-202ENST00000382998 NUTM2BA6NNL0 878 aaPredicted RBP16.6■□□□□ 0.25
CTIF-202ENST00000382998 NUTM2EB1AL46 878 aaPredicted RBP16.6■□□□□ 0.25
CTIF-202ENST00000382998 NUTM2AQ8IVF1 878 aaPredicted RBP16.6■□□□□ 0.25
CTIF-202ENST00000382998 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
CTIF-202ENST00000382998 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
CTIF-202ENST00000382998 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
CTIF-202ENST00000382998 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
CTIF-202ENST00000382998 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
CTIF-202ENST00000382998 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
CTIF-202ENST00000382998 LOC102724159A0A0B4J2E5 919 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 NRDCO43847 1150 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 PWP2Q15269 919 aaKnown RBP16.59■□□□□ 0.25
CTIF-202ENST00000382998 PANK3Q9H999 370 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 CCDC39Q9UFE4 941 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 HSPA2P54652 639 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 CNTLNQ9NXG0 1405 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
CTIF-202ENST00000382998 DAPK1P53355 1430 aa16.58■□□□□ 0.25
CTIF-202ENST00000382998 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
CTIF-202ENST00000382998 TMEM51Q9NW97 253 aa16.58■□□□□ 0.24
CTIF-202ENST00000382998 RSPH14Q9UHP6 348 aa16.58■□□□□ 0.24
CTIF-202ENST00000382998 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
CTIF-202ENST00000382998 XPCQ01831 940 aaPredicted RBP16.58■□□□□ 0.24
CTIF-202ENST00000382998 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
CTIF-202ENST00000382998 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.24
CTIF-202ENST00000382998 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
CTIF-202ENST00000382998 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■■□ 23.6
CTIF-202ENST00000382998 TPM3P06753 285 aa16.56■□□□□ 0.24
CTIF-202ENST00000382998 IDI1Q13907 227 aa16.56■□□□□ 0.24
CTIF-202ENST00000382998 NUP160Q12769 1436 aa16.56■□□□□ 0.24
CTIF-202ENST00000382998 NLRP6P59044 892 aa16.56■□□□□ 0.24
CTIF-202ENST00000382998 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
CTIF-202ENST00000382998 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
CTIF-202ENST00000382998 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
CTIF-202ENST00000382998 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
CTIF-202ENST00000382998 PTPRKQ15262 1439 aa16.55■□□□□ 0.24
CTIF-202ENST00000382998 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
CTIF-202ENST00000382998 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 KIF14Q15058 1648 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 WDR7Q9Y4E6 1490 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 ZBTB22O15209 634 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 OFD1O75665 1012 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
CTIF-202ENST00000382998 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
CTIF-202ENST00000382998 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTIF-202ENST00000382998 MNAT1P51948 309 aa16.53■□□□□ 0.24
CTIF-202ENST00000382998 AK7Q96M32 723 aa16.53■□□□□ 0.24
CTIF-202ENST00000382998 BIRC2Q13490 618 aa16.53■□□□□ 0.24
CTIF-202ENST00000382998 RPAINQ86UA6 219 aa16.53■□□□□ 0.24
CTIF-202ENST00000382998 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
CTIF-202ENST00000382998 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
CTIF-202ENST00000382998 PPP2R5AQ15172 486 aa16.52■□□□□ 0.24
CTIF-202ENST00000382998 CEP83Q9Y592 693 aa16.52■□□□□ 0.24
CTIF-202ENST00000382998 POLD1P28340 1107 aa16.52■□□□□ 0.23
CTIF-202ENST00000382998 CEP120Q8N960 986 aa16.52■□□□□ 0.23
CTIF-202ENST00000382998 EFCC1Q9HA90 598 aa16.52■□□□□ 0.23
CTIF-202ENST00000382998 CAMSAP2Q08AD1 1489 aa16.51■□□□□ 0.23
CTIF-202ENST00000382998 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
CTIF-202ENST00000382998 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
CTIF-202ENST00000382998 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
CTIF-202ENST00000382998 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
CTIF-202ENST00000382998 NUP153P49790 1475 aaKnown RBP16.5■□□□□ 0.23
CTIF-202ENST00000382998 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
CTIF-202ENST00000382998 SATB1Q01826 763 aa16.5■□□□□ 0.23
CTIF-202ENST00000382998 MAP2K1Q02750 393 aaPredicted RBP16.5■□□□□ 0.23
CTIF-202ENST00000382998 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
CTIF-202ENST00000382998 CGNL1Q0VF96 1302 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 ZNF500O60304 480 aaPredicted RBP16.49■□□□□ 0.23
CTIF-202ENST00000382998 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 GGNBP2Q9H3C7 697 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
CTIF-202ENST00000382998 PLCH2O75038 1416 aa16.48■□□□□ 0.23
CTIF-202ENST00000382998 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
CTIF-202ENST00000382998 PLIN1O60240 522 aa16.48■□□□□ 0.23
CTIF-202ENST00000382998 ARGLU1Q9NWB6 273 aaPredicted RBP16.48■□□□□ 0.23
CTIF-202ENST00000382998 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 CALR3Q96L12 384 aaKnown RBP16.47■□□□□ 0.23
CTIF-202ENST00000382998 STRN4Q9NRL3 753 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 ABCC2Q92887 1545 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 AP1ARQ63HQ0 302 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 PTPN23Q9H3S7 1636 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 ABCC5O15440 1437 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
CTIF-202ENST00000382998 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
CTIF-202ENST00000382998 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
CTIF-202ENST00000382998 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
CTIF-202ENST00000382998 CCDC172P0C7W6 258 aa16.46■□□□□ 0.23
CTIF-202ENST00000382998 TPM4P67936 248 aa16.46■□□□□ 0.23
CTIF-202ENST00000382998 TTC31Q49AM3 519 aaPredicted RBP16.46■□□□□ 0.23
CTIF-202ENST00000382998 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms