RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
RC3H2-201ENST00000335387 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
RC3H2-201ENST00000335387 C3P01024 1663 aa17.19■□□□□ 0.34
RC3H2-201ENST00000335387 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
RC3H2-201ENST00000335387 CPS1P31327 1500 aa17.19■□□□□ 0.34
RC3H2-201ENST00000335387 RAPGEF3O95398 923 aa17.19■□□□□ 0.34
RC3H2-201ENST00000335387 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
RC3H2-201ENST00000335387 RLBP1P12271 317 aa17.18■□□□□ 0.34
RC3H2-201ENST00000335387 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
RC3H2-201ENST00000335387 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
RC3H2-201ENST00000335387 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
RC3H2-201ENST00000335387 TECPR2O15040 1411 aa17.17■□□□□ 0.34
RC3H2-201ENST00000335387 CPSF1Q10570 1443 aaKnown RBP17.17■□□□□ 0.34
RC3H2-201ENST00000335387 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
RC3H2-201ENST00000335387 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
RC3H2-201ENST00000335387 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
RC3H2-201ENST00000335387 FYB1O15117 783 aa17.16■□□□□ 0.34
RC3H2-201ENST00000335387 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
RC3H2-201ENST00000335387 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
RC3H2-201ENST00000335387 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
RC3H2-201ENST00000335387 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
RC3H2-201ENST00000335387 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
RC3H2-201ENST00000335387 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
RC3H2-201ENST00000335387 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
RC3H2-201ENST00000335387 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
RC3H2-201ENST00000335387 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
RC3H2-201ENST00000335387 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
RC3H2-201ENST00000335387 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
RC3H2-201ENST00000335387 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
RC3H2-201ENST00000335387 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
RC3H2-201ENST00000335387 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
RC3H2-201ENST00000335387 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
RC3H2-201ENST00000335387 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
RC3H2-201ENST00000335387 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
RC3H2-201ENST00000335387 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
RC3H2-201ENST00000335387 RGS3P49796 1198 aa17.12■□□□□ 0.33
RC3H2-201ENST00000335387 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
RC3H2-201ENST00000335387 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
RC3H2-201ENST00000335387 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
RC3H2-201ENST00000335387 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
RC3H2-201ENST00000335387 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
RC3H2-201ENST00000335387 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
RC3H2-201ENST00000335387 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
RC3H2-201ENST00000335387 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
RC3H2-201ENST00000335387 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
RC3H2-201ENST00000335387 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
RC3H2-201ENST00000335387 FCHSD2O94868 740 aa17.09■□□□□ 0.33
RC3H2-201ENST00000335387 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
RC3H2-201ENST00000335387 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
RC3H2-201ENST00000335387 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
RC3H2-201ENST00000335387 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.33
RC3H2-201ENST00000335387 TNNQ9UQP3 1299 aa17.08■□□□□ 0.33
RC3H2-201ENST00000335387 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.32
RC3H2-201ENST00000335387 GSE1Q14687 1217 aa17.08■□□□□ 0.32
RC3H2-201ENST00000335387 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
RC3H2-201ENST00000335387 SEC24BO95487 1268 aa17.07■□□□□ 0.32
RC3H2-201ENST00000335387 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
RC3H2-201ENST00000335387 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
RC3H2-201ENST00000335387 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
RC3H2-201ENST00000335387 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
RC3H2-201ENST00000335387 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
RC3H2-201ENST00000335387 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
RC3H2-201ENST00000335387 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
RC3H2-201ENST00000335387 TRIM27P14373 513 aa17.06■□□□□ 0.32
RC3H2-201ENST00000335387 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
RC3H2-201ENST00000335387 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
RC3H2-201ENST00000335387 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
RC3H2-201ENST00000335387 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
RC3H2-201ENST00000335387 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
RC3H2-201ENST00000335387 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
RC3H2-201ENST00000335387 NEUROD2Q15784 382 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 BECN1Q14457 450 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
RC3H2-201ENST00000335387 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
RC3H2-201ENST00000335387 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
RC3H2-201ENST00000335387 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
RC3H2-201ENST00000335387 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
RC3H2-201ENST00000335387 ZNF853P0CG23 659 aa17.02■□□□□ 0.31
RC3H2-201ENST00000335387 SLC4A3P48751 1232 aa17.02■□□□□ 0.31
RC3H2-201ENST00000335387 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.31
RC3H2-201ENST00000335387 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
RC3H2-201ENST00000335387 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
RC3H2-201ENST00000335387 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
RC3H2-201ENST00000335387 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
RC3H2-201ENST00000335387 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
RC3H2-201ENST00000335387 POGKQ9P215 609 aa16.99■□□□□ 0.31
RC3H2-201ENST00000335387 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
RC3H2-201ENST00000335387 RIPK4P57078 832 aa16.99■□□□□ 0.31
RC3H2-201ENST00000335387 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
RC3H2-201ENST00000335387 FTSJ3Q8IY81 847 aaKnown RBP16.99■□□□□ 0.31
RC3H2-201ENST00000335387 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
RC3H2-201ENST00000335387 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
RC3H2-201ENST00000335387 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
RC3H2-201ENST00000335387 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
RC3H2-201ENST00000335387 IL13P35225 146 aa16.98■□□□□ 0.31
RC3H2-201ENST00000335387 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
RC3H2-201ENST00000335387 STK26Q9P289 416 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms