RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 SLC12A5Q9H2X9 1139 aa13.02□□□□□ -0.33
SF3B2-201ENST00000322535 LTKP29376 864 aa13.01□□□□□ -0.33
SF3B2-201ENST00000322535 TNRQ92752 1358 aa13.01□□□□□ -0.33
SF3B2-201ENST00000322535 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-201ENST00000322535 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
SF3B2-201ENST00000322535 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
SF3B2-201ENST00000322535 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
SF3B2-201ENST00000322535 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
SF3B2-201ENST00000322535 CHMP4CQ96CF2 233 aa13□□□□□ -0.33
SF3B2-201ENST00000322535 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
SF3B2-201ENST00000322535 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
SF3B2-201ENST00000322535 PPLO60437 1756 aa13□□□□□ -0.33
SF3B2-201ENST00000322535 ZC3H13Q5T200 1668 aaKnown RBP13□□□□□ -0.33
SF3B2-201ENST00000322535 FSD2A1L4K1 749 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 KIF20AO95235 890 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
SF3B2-201ENST00000322535 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 MYOM2P54296 1465 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 A2ML1A8K2U0 1454 aa12.99□□□□□ -0.33
SF3B2-201ENST00000322535 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
SF3B2-201ENST00000322535 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
SF3B2-201ENST00000322535 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
SF3B2-201ENST00000322535 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
SF3B2-201ENST00000322535 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
SF3B2-201ENST00000322535 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
SF3B2-201ENST00000322535 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
SF3B2-201ENST00000322535 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SF3B2-201ENST00000322535 MRE11P49959 708 aa12.97□□□□□ -0.33
SF3B2-201ENST00000322535 GRPEL1Q9HAV7 217 aa12.97□□□□□ -0.33
SF3B2-201ENST00000322535 BECN1Q14457 450 aa12.97□□□□□ -0.33
SF3B2-201ENST00000322535 CGNQ9P2M7 1197 aaKnown RBP12.97□□□□□ -0.33
SF3B2-201ENST00000322535 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
SF3B2-201ENST00000322535 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
SF3B2-201ENST00000322535 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
SF3B2-201ENST00000322535 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.34
SF3B2-201ENST00000322535 PNISRQ8TF01 805 aaKnown RBP12.95□□□□□ -0.34
SF3B2-201ENST00000322535 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 METP08581 1390 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 TRAK2O60296 914 aa12.95□□□□□ -0.34
SF3B2-201ENST00000322535 IQGAP1P46940 1657 aa12.94□□□□□ -0.34
SF3B2-201ENST00000322535 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
SF3B2-201ENST00000322535 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
SF3B2-201ENST00000322535 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
SF3B2-201ENST00000322535 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-201ENST00000322535 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-201ENST00000322535 SEC24BO95487 1268 aa12.93□□□□□ -0.34
SF3B2-201ENST00000322535 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
SF3B2-201ENST00000322535 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-201ENST00000322535 MCM4P33991 863 aa12.92□□□□□ -0.34
SF3B2-201ENST00000322535 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
SF3B2-201ENST00000322535 OFD1O75665 1012 aa12.92□□□□□ -0.34
SF3B2-201ENST00000322535 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
SF3B2-201ENST00000322535 SOX12O15370 315 aa12.92□□□□□ -0.34
SF3B2-201ENST00000322535 PSEN1P49768 467 aa12.92□□□□□ -0.34
SF3B2-201ENST00000322535 MMP14P50281 582 aa12.92□□□□□ -0.34
SF3B2-201ENST00000322535 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-201ENST00000322535 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
SF3B2-201ENST00000322535 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
SF3B2-201ENST00000322535 FAM193AP78312 1265 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 UQCRHLA0A096LP55 91 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 UQCRHP07919 91 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 MSNP26038 577 aaKnown RBP12.9□□□□□ -0.34
SF3B2-201ENST00000322535 CBX1P83916 185 aa12.9□□□□□ -0.34
SF3B2-201ENST00000322535 PTPRMP28827 1452 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-201ENST00000322535 CDK19Q9BWU1 502 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 ALKQ9UM73 1620 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 LAMC1P11047 1609 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 IGSF3O75054 1194 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 FBLN1P23142 703 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 EID1Q9Y6B2 187 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 C3P01024 1663 aa12.89□□□□□ -0.35
SF3B2-201ENST00000322535 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
SF3B2-201ENST00000322535 APPP05067 770 aa12.88□□□□□ -0.35
SF3B2-201ENST00000322535 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
SF3B2-201ENST00000322535 NEURL4Q96JN8 1562 aa12.88□□□□□ -0.35
SF3B2-201ENST00000322535 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
SF3B2-201ENST00000322535 ZFYVE9O95405 1425 aa12.87□□□□□ -0.35
SF3B2-201ENST00000322535 MTERF4Q7Z6M4 381 aaKnown RBP12.87□□□□□ -0.35
SF3B2-201ENST00000322535 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.87□□□□□ -0.35
SF3B2-201ENST00000322535 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
SF3B2-201ENST00000322535 TERF1P54274 439 aa12.87□□□□□ -0.35
SF3B2-201ENST00000322535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
SF3B2-201ENST00000322535 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
SF3B2-201ENST00000322535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-201ENST00000322535 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
SF3B2-201ENST00000322535 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-201ENST00000322535 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-201ENST00000322535 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-201ENST00000322535 KIAA1210Q9ULL0 1709 aa12.86□□□□□ -0.35
SF3B2-201ENST00000322535 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
SF3B2-201ENST00000322535 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms