RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 NPATQ14207 1427 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
H3F3B-201ENST00000254810 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
H3F3B-201ENST00000254810 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
H3F3B-201ENST00000254810 CLCN1P35523 988 aa16.88■□□□□ 0.29
H3F3B-201ENST00000254810 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
H3F3B-201ENST00000254810 GAS2L3Q86XJ1 694 aa16.88■□□□□ 0.29
H3F3B-201ENST00000254810 GLI2P10070 1586 aa16.88■□□□□ 0.29
H3F3B-201ENST00000254810 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
H3F3B-201ENST00000254810 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
H3F3B-201ENST00000254810 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
H3F3B-201ENST00000254810 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
H3F3B-201ENST00000254810 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
H3F3B-201ENST00000254810 NUCB1Q02818 461 aa16.87■□□□□ 0.29
H3F3B-201ENST00000254810 KIF2CQ99661 725 aa16.87■□□□□ 0.29
H3F3B-201ENST00000254810 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
H3F3B-201ENST00000254810 MRE11P49959 708 aa16.86■□□□□ 0.29
H3F3B-201ENST00000254810 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
H3F3B-201ENST00000254810 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
H3F3B-201ENST00000254810 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
H3F3B-201ENST00000254810 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
H3F3B-201ENST00000254810 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
H3F3B-201ENST00000254810 NSD2O96028 1365 aa16.85■□□□□ 0.29
H3F3B-201ENST00000254810 RIPK4P57078 832 aa16.84■□□□□ 0.29
H3F3B-201ENST00000254810 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
H3F3B-201ENST00000254810 GGT6Q6P531 493 aa16.84■□□□□ 0.29
H3F3B-201ENST00000254810 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.29
H3F3B-201ENST00000254810 SNX21Q969T3 373 aa16.83■□□□□ 0.29
H3F3B-201ENST00000254810 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.29
H3F3B-201ENST00000254810 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.29
H3F3B-201ENST00000254810 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
H3F3B-201ENST00000254810 ABCC11Q96J66 1382 aa16.83■□□□□ 0.28
H3F3B-201ENST00000254810 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
H3F3B-201ENST00000254810 FYB1O15117 783 aa16.81■□□□□ 0.28
H3F3B-201ENST00000254810 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
H3F3B-201ENST00000254810 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
H3F3B-201ENST00000254810 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
H3F3B-201ENST00000254810 FBLN1P23142 703 aa16.8■□□□□ 0.28
H3F3B-201ENST00000254810 STK26Q9P289 416 aa16.8■□□□□ 0.28
H3F3B-201ENST00000254810 IL16Q14005 1332 aa16.8■□□□□ 0.28
H3F3B-201ENST00000254810 CFAP74Q9C0B2 1584 aa16.79■□□□□ 0.28
H3F3B-201ENST00000254810 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
H3F3B-201ENST00000254810 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
H3F3B-201ENST00000254810 ESPNB1AK53 854 aa16.78■□□□□ 0.28
H3F3B-201ENST00000254810 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
H3F3B-201ENST00000254810 BMP2KLQ5H9B9 411 aa16.78■□□□□ 0.28
H3F3B-201ENST00000254810 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
H3F3B-201ENST00000254810 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
H3F3B-201ENST00000254810 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
H3F3B-201ENST00000254810 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
H3F3B-201ENST00000254810 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
H3F3B-201ENST00000254810 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.28
H3F3B-201ENST00000254810 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
H3F3B-201ENST00000254810 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
H3F3B-201ENST00000254810 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.28
H3F3B-201ENST00000254810 SSFA2P28290 1259 aa16.76■□□□□ 0.27
H3F3B-201ENST00000254810 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
H3F3B-201ENST00000254810 MED14O60244 1454 aa16.76■□□□□ 0.27
H3F3B-201ENST00000254810 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
H3F3B-201ENST00000254810 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
H3F3B-201ENST00000254810 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
H3F3B-201ENST00000254810 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
H3F3B-201ENST00000254810 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
H3F3B-201ENST00000254810 ABCC3O15438 1527 aa16.75■□□□□ 0.27
H3F3B-201ENST00000254810 LRRC7Q96NW7 1537 aa16.75■□□□□ 0.27
H3F3B-201ENST00000254810 HECW2Q9P2P5 1572 aa16.74■□□□□ 0.27
H3F3B-201ENST00000254810 ASXL2Q76L83 1435 aa16.74■□□□□ 0.27
H3F3B-201ENST00000254810 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
H3F3B-201ENST00000254810 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
H3F3B-201ENST00000254810 K7ELQ4 463 aaPredicted RBP16.73■□□□□ 0.27
H3F3B-201ENST00000254810 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
H3F3B-201ENST00000254810 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
H3F3B-201ENST00000254810 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
H3F3B-201ENST00000254810 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
H3F3B-201ENST00000254810 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
H3F3B-201ENST00000254810 VAMP4O75379 141 aa16.72■□□□□ 0.27
H3F3B-201ENST00000254810 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
H3F3B-201ENST00000254810 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
H3F3B-201ENST00000254810 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
H3F3B-201ENST00000254810 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
H3F3B-201ENST00000254810 ISY1Q9ULR0 285 aaKnown RBP16.71■□□□□ 0.27
H3F3B-201ENST00000254810 AK9Q5TCS8 1911 aa16.71■□□□□ 0.27
H3F3B-201ENST00000254810 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.27
H3F3B-201ENST00000254810 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
H3F3B-201ENST00000254810 PTPRMP28827 1452 aa16.7■□□□□ 0.26
H3F3B-201ENST00000254810 HMOX1P09601 288 aa16.7■□□□□ 0.26
H3F3B-201ENST00000254810 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
H3F3B-201ENST00000254810 IDI1Q13907 227 aa16.69■□□□□ 0.26
H3F3B-201ENST00000254810 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
H3F3B-201ENST00000254810 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
H3F3B-201ENST00000254810 PIK3R4Q99570 1358 aa16.69■□□□□ 0.26
H3F3B-201ENST00000254810 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
H3F3B-201ENST00000254810 PTCH1Q13635 1447 aa16.68■□□□□ 0.26
H3F3B-201ENST00000254810 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
H3F3B-201ENST00000254810 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
H3F3B-201ENST00000254810 FCHSD2O94868 740 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms