RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PDE4CQ08493 712 aa25.53■■□□□ 1.68
HOXC13-201ENST00000243056 C8orf34Q49A92 452 aa25.53■■□□□ 1.68
HOXC13-201ENST00000243056 PDCL3Q9H2J4 239 aa25.53■■□□□ 1.68
HOXC13-201ENST00000243056 MYOM1P52179 1685 aa25.52■■□□□ 1.68
HOXC13-201ENST00000243056 KNSTRNQ9Y448 316 aa25.51■■□□□ 1.67
HOXC13-201ENST00000243056 PNISRQ8TF01 805 aaKnown RBP25.5■■□□□ 1.67
HOXC13-201ENST00000243056 ZNF142P52746 1687 aaPredicted RBP25.49■■□□□ 1.67
HOXC13-201ENST00000243056 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
HOXC13-201ENST00000243056 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
HOXC13-201ENST00000243056 AMER1Q5JTC6 1135 aaPredicted RBP25.46■■□□□ 1.67
HOXC13-201ENST00000243056 FSD2A1L4K1 749 aa25.45■■□□□ 1.66
HOXC13-201ENST00000243056 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
HOXC13-201ENST00000243056 ERBB4Q15303 1308 aa25.43■■□□□ 1.66
HOXC13-201ENST00000243056 DLC1Q96QB1 1528 aa25.43■■□□□ 1.66
HOXC13-201ENST00000243056 GOLGA6L3A6NEY3 463 aa25.43■■□□□ 1.66
HOXC13-201ENST00000243056 PLIN1O60240 522 aa25.43■■□□□ 1.66
HOXC13-201ENST00000243056 CRBNQ96SW2 442 aa25.43■■□□□ 1.66
HOXC13-201ENST00000243056 TECPR2O15040 1411 aa25.42■■□□□ 1.66
HOXC13-201ENST00000243056 KTN1Q86UP2 1357 aaKnown RBP25.42■■□□□ 1.66
HOXC13-201ENST00000243056 TPM2P07951 284 aa25.42■■□□□ 1.66
HOXC13-201ENST00000243056 TNNT2P45379 298 aaPredicted RBP25.41■■□□□ 1.66
HOXC13-201ENST00000243056 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
HOXC13-201ENST00000243056 KDM2BQ8NHM5 1336 aa25.4■■□□□ 1.66
HOXC13-201ENST00000243056 FAM135BQ49AJ0 1406 aa25.39■■□□□ 1.65
HOXC13-201ENST00000243056 NSD3Q9BZ95 1437 aa25.39■■□□□ 1.65
HOXC13-201ENST00000243056 PRR36Q9H6K5 1346 aa25.38■■□□□ 1.65
HOXC13-201ENST00000243056 CPS1P31327 1500 aa25.38■■□□□ 1.65
HOXC13-201ENST00000243056 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
HOXC13-201ENST00000243056 NUDT16Q96DE0 195 aaKnown RBP25.37■■□□□ 1.65
HOXC13-201ENST00000243056 A0A1W2PP64 1363 aa25.37■■□□□ 1.65
HOXC13-201ENST00000243056 ESPNB1AK53 854 aa25.36■■□□□ 1.65
HOXC13-201ENST00000243056 SIRT1Q96EB6 747 aa25.36■■□□□ 1.65
HOXC13-201ENST00000243056 PARD3Q8TEW0 1356 aa25.36■■□□□ 1.65
HOXC13-201ENST00000243056 RALBP1Q15311 655 aa25.35■■□□□ 1.65
HOXC13-201ENST00000243056 MYBBP1AQ9BQG0 1328 aaKnown RBP25.34■■□□□ 1.65
HOXC13-201ENST00000243056 SLKQ9H2G2 1235 aaPredicted RBP25.33■■□□□ 1.65
HOXC13-201ENST00000243056 KNDC1Q76NI1 1749 aa25.33■■□□□ 1.64
HOXC13-201ENST00000243056 ATAD2Q6PL18 1390 aa25.32■■□□□ 1.64
HOXC13-201ENST00000243056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.32■■□□□ 1.64
HOXC13-201ENST00000243056 CD163L1Q9NR16 1453 aa25.31■■□□□ 1.64
HOXC13-201ENST00000243056 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
HOXC13-201ENST00000243056 ANKRD36BQ8N2N9 1353 aa25.3■■□□□ 1.64
HOXC13-201ENST00000243056 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
HOXC13-201ENST00000243056 PUS7Q96PZ0 661 aaKnown RBP25.3■■□□□ 1.64
HOXC13-201ENST00000243056 LMTK3Q96Q04 1460 aa25.3■■□□□ 1.64
HOXC13-201ENST00000243056 BCL11BQ9C0K0 894 aaPredicted RBP25.29■■□□□ 1.64
HOXC13-201ENST00000243056 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
HOXC13-201ENST00000243056 GZF1Q9H116 711 aaPredicted RBP25.28■■□□□ 1.64
HOXC13-201ENST00000243056 DIP2AQ14689 1571 aa25.28■■□□□ 1.64
HOXC13-201ENST00000243056 USP19O94966 1318 aa25.28■■□□□ 1.64
HOXC13-201ENST00000243056 PPP2R1AP30153 589 aa25.28■■□□□ 1.64
HOXC13-201ENST00000243056 CCDC61Q9Y6R9 512 aa25.28■■□□□ 1.64
HOXC13-201ENST00000243056 FBLN1P23142 703 aa25.27■■□□□ 1.64
HOXC13-201ENST00000243056 C14orf37Q86TY3 774 aa25.27■■□□□ 1.64
HOXC13-201ENST00000243056 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
HOXC13-201ENST00000243056 ANTXR1Q9H6X2 564 aa25.26■■□□□ 1.63
HOXC13-201ENST00000243056 TERF2IPQ9NYB0 399 aa25.26■■□□□ 1.63
HOXC13-201ENST00000243056 PTCH1Q13635 1447 aa25.26■■□□□ 1.63
HOXC13-201ENST00000243056 CDCA7LQ96GN5 454 aa25.26■■□□□ 1.63
HOXC13-201ENST00000243056 CENPQQ7L2Z9 268 aaPredicted RBP25.25■■□□□ 1.63
HOXC13-201ENST00000243056 NLRP13Q86W25 1043 aa25.25■■□□□ 1.63
HOXC13-201ENST00000243056 ZRANB1Q9UGI0 708 aa25.25■■□□□ 1.63
HOXC13-201ENST00000243056 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
HOXC13-201ENST00000243056 KIAA1211Q6ZU35 1233 aa25.24■■□□□ 1.63
HOXC13-201ENST00000243056 HDGFL2Q7Z4V5 671 aaPredicted RBP25.24■■□□□ 1.63
HOXC13-201ENST00000243056 MORC1Q86VD1 984 aa25.24■■□□□ 1.63
HOXC13-201ENST00000243056 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
HOXC13-201ENST00000243056 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
HOXC13-201ENST00000243056 ATP7BP35670 1465 aa25.23■■□□□ 1.63
HOXC13-201ENST00000243056 FYB1O15117 783 aa25.23■■□□□ 1.63
HOXC13-201ENST00000243056 CGNL1Q0VF96 1302 aa25.23■■□□□ 1.63
HOXC13-201ENST00000243056 PROSER2Q86WR7 435 aaPredicted RBP25.22■■□□□ 1.63
HOXC13-201ENST00000243056 MRE11P49959 708 aa25.22■■□□□ 1.63
HOXC13-201ENST00000243056 PDIA4P13667 645 aaKnown RBP25.2■■□□□ 1.62
HOXC13-201ENST00000243056 RIPK4P57078 832 aa25.2■■□□□ 1.62
HOXC13-201ENST00000243056 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
HOXC13-201ENST00000243056 ACEP12821 1306 aa25.19■■□□□ 1.62
HOXC13-201ENST00000243056 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
HOXC13-201ENST00000243056 NME9Q86XW9 330 aa25.19■■□□□ 1.62
HOXC13-201ENST00000243056 BRD4O60885 1362 aaPredicted RBP25.17■■□□□ 1.62
HOXC13-201ENST00000243056 GRPEL1Q9HAV7 217 aa25.16■■□□□ 1.62
HOXC13-201ENST00000243056 NINLQ9Y2I6 1382 aa25.16■■□□□ 1.62
HOXC13-201ENST00000243056 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
HOXC13-201ENST00000243056 NKTRP30414 1462 aaKnown RBP25.16■■□□□ 1.62
HOXC13-201ENST00000243056 BECN1Q14457 450 aa25.15■■□□□ 1.62
HOXC13-201ENST00000243056 ZHX1Q9UKY1 873 aaPredicted RBP25.15■■□□□ 1.62
HOXC13-201ENST00000243056 NPC1L1Q9UHC9 1359 aa25.15■■□□□ 1.62
HOXC13-201ENST00000243056 VIRMAQ69YN4 1812 aaKnown RBP25.15■■□□□ 1.62
HOXC13-201ENST00000243056 CPSF1Q10570 1443 aaKnown RBP25.14■■□□□ 1.61
HOXC13-201ENST00000243056 ZNF335Q9H4Z2 1342 aaPredicted RBP25.13■■□□□ 1.61
HOXC13-201ENST00000243056 SMAP1Q8IYB5 467 aaPredicted RBP25.13■■□□□ 1.61
HOXC13-201ENST00000243056 USP32Q8NFA0 1604 aa25.13■■□□□ 1.61
HOXC13-201ENST00000243056 ADGRB2O60241 1585 aa25.13■■□□□ 1.61
HOXC13-201ENST00000243056 MCM4P33991 863 aa25.13■■□□□ 1.61
HOXC13-201ENST00000243056 NGDNQ8NEJ9 315 aaKnown RBP25.13■■□□□ 1.61
HOXC13-201ENST00000243056 STRCQ7RTU9 1775 aa25.12■■□□□ 1.61
HOXC13-201ENST00000243056 NALCNQ8IZF0 1738 aa25.12■■□□□ 1.61
HOXC13-201ENST00000243056 SEC24BO95487 1268 aa25.11■■□□□ 1.61
HOXC13-201ENST00000243056 MTHFSP49914 203 aa25.11■■□□□ 1.61
HOXC13-201ENST00000243056 BBXQ8WY36 941 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms