RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SLC52A1Q9NWF4 448 aa10.52□□□□□ -0.73
CDC27-201ENST00000066544 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 MLH3Q9UHC1 1453 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 SOX12O15370 315 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 PLEKHF1Q96S99 279 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 EMILIN1Q9Y6C2 1016 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 LMTK2Q8IWU2 1503 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 GLI2P10070 1586 aa10.51□□□□□ -0.73
CDC27-201ENST00000066544 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 PHACTR3Q96KR7 559 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 TBC1D2Q9BYX2 928 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 SETBP1Q9Y6X0 1596 aa10.5□□□□□ -0.73
CDC27-201ENST00000066544 ABCC11Q96J66 1382 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
CDC27-201ENST00000066544 DDX19BQ9UMR2 479 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 NME9Q86XW9 330 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 TBC1D32Q96NH3 1257 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 PPLO60437 1756 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
CDC27-201ENST00000066544 HECW2Q9P2P5 1572 aa10.49□□□□□ -0.73
CDC27-201ENST00000066544 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 RRS1Q15050 365 aaKnown RBP10.48□□□□□ -0.73
CDC27-201ENST00000066544 DCTN1Q14203 1278 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 TSPYL6Q8N831 410 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 C22orf23Q9BZE7 217 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 POLKQ9UBT6 870 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 NSD2O96028 1365 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 ATAD2Q6PL18 1390 aa10.48□□□□□ -0.73
CDC27-201ENST00000066544 MYO3AQ8NEV4 1616 aa10.47□□□□□ -0.73
CDC27-201ENST00000066544 NEURL4Q96JN8 1562 aa10.47□□□□□ -0.73
CDC27-201ENST00000066544 YTHDC2Q9H6S0 1430 aaKnown RBP10.47□□□□□ -0.73
CDC27-201ENST00000066544 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
CDC27-201ENST00000066544 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
CDC27-201ENST00000066544 SIGLEC1Q9BZZ2 1709 aa10.47□□□□□ -0.73
CDC27-201ENST00000066544 NEXMIFQ5QGS0 1516 aa10.46□□□□□ -0.73
CDC27-201ENST00000066544 IPO8O15397 1037 aaKnown RBP10.46□□□□□ -0.73
CDC27-201ENST00000066544 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
CDC27-201ENST00000066544 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.73
CDC27-201ENST00000066544 FOXD4L1Q9NU39 408 aa10.46□□□□□ -0.73
CDC27-201ENST00000066544 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.74
CDC27-201ENST00000066544 APBB1O00213 710 aa10.45□□□□□ -0.74
CDC27-201ENST00000066544 AAMPQ13685 434 aa10.45□□□□□ -0.74
CDC27-201ENST00000066544 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
CDC27-201ENST00000066544 KIF16BQ96L93 1317 aa10.44□□□□□ -0.74
CDC27-201ENST00000066544 FCHSD2O94868 740 aa10.44□□□□□ -0.74
CDC27-201ENST00000066544 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
CDC27-201ENST00000066544 ARHGEF28Q8N1W1 1705 aaKnown RBP10.44□□□□□ -0.74
CDC27-201ENST00000066544 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
CDC27-201ENST00000066544 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
CDC27-201ENST00000066544 ESF1Q9H501 851 aaKnown RBP10.43□□□□□ -0.74
CDC27-201ENST00000066544 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
CDC27-201ENST00000066544 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
CDC27-201ENST00000066544 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
CDC27-201ENST00000066544 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
CDC27-201ENST00000066544 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 ZC3H13Q5T200 1668 aaKnown RBP10.42□□□□□ -0.74
CDC27-201ENST00000066544 PTPRMP28827 1452 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 PIK3C2BO00750 1634 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 ANTXR1Q9H6X2 564 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 DIP2CQ9Y2E4 1556 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 C8orf58Q8NAV2 365 aa10.42□□□□□ -0.74
CDC27-201ENST00000066544 VAMP4O75379 141 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 HSCBQ8IWL3 235 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
CDC27-201ENST00000066544 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
CDC27-201ENST00000066544 COG3Q96JB2 828 aa10.41□□□□□ -0.74
CDC27-201ENST00000066544 MYO5BQ9ULV0 1848 aa10.4□□□□□ -0.74
CDC27-201ENST00000066544 NUDT16Q96DE0 195 aaKnown RBP10.4□□□□□ -0.74
CDC27-201ENST00000066544 IL16Q14005 1332 aa10.4□□□□□ -0.74
CDC27-201ENST00000066544 NEO1Q92859 1461 aa10.4□□□□□ -0.74
CDC27-201ENST00000066544 COL3A1P02461 1466 aaPredicted RBP10.39□□□□□ -0.75
CDC27-201ENST00000066544 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
CDC27-201ENST00000066544 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
CDC27-201ENST00000066544 GNAI1P63096 354 aa10.39□□□□□ -0.75
CDC27-201ENST00000066544 NUCB1Q02818 461 aa10.39□□□□□ -0.75
CDC27-201ENST00000066544 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
CDC27-201ENST00000066544 SULT6B1Q6IMI4 303 aa10.39□□□□□ -0.75
CDC27-201ENST00000066544 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
CDC27-201ENST00000066544 MIS18AQ9NYP9 233 aa10.39□□□□□ -0.75
CDC27-201ENST00000066544 ARHGAP31Q2M1Z3 1444 aa10.39□□□□□ -0.75
CDC27-201ENST00000066544 ZBTB7BO15156 539 aaPredicted RBP10.38□□□□□ -0.75
CDC27-201ENST00000066544 MCM4P33991 863 aa10.38□□□□□ -0.75
CDC27-201ENST00000066544 MCM10Q7L590 875 aa10.38□□□□□ -0.75
CDC27-201ENST00000066544 EIF5BO60841 1220 aaKnown RBP10.38□□□□□ -0.75
CDC27-201ENST00000066544 IL13P35225 146 aa10.38□□□□□ -0.75
CDC27-201ENST00000066544 ALDH1L2Q3SY69 923 aa10.38□□□□□ -0.75
CDC27-201ENST00000066544 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
CDC27-201ENST00000066544 ADGRB2O60241 1585 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 SIRT2Q8IXJ6 389 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 PPIP5K1Q6PFW1 1433 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms