RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 Znf316Q6PGE4 1016 aa20.41■□□□□ 0.86
Ccdc43-201ENSMUST00000092569 Smc5Q8CG46 1101 aaKnown RBP20.4■□□□□ 0.86
Ccdc43-201ENSMUST00000092569 Trim58Q5NCC9 485 aa20.39■□□□□ 0.86
Ccdc43-201ENSMUST00000092569 Znf521Q6KAS7 1311 aa20.39■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Chmp5Q9D7S9 219 aa20.39■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 EspnQ9ET47 871 aa20.39■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Slc12a5Q91V14 1138 aa20.38■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 HnrnpmQ9D0E1 729 aaKnown RBP20.38■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 4930407I10RikD3Z5T8 1512 aa20.37■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Zmym3Q9JLM4 1370 aa20.37■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Dip2bQ3UH60 1574 aa20.37■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Mapk8ip3Q9ESN9 1337 aa20.37■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Ncbp3Q8BZR9 615 aaKnown RBP20.37■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Ecm2Q5FW85 670 aa20.36■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Ccar1Q8CH18 1146 aaKnown RBP20.35■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Trim28Q62318 834 aa20.35■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Gemin5Q8BX17 1502 aaKnown RBP20.35■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Fam135bQ9DAI6 1403 aa20.34■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Duxf3A0A0N4SV92 674 aa20.34■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 PalmQ9Z0P4 383 aa20.34■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Birc3O08863 600 aa20.33■□□□□ 0.85
Ccdc43-201ENSMUST00000092569 Cavin4A2AMM0 362 aa20.32■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Slit3Q9WVB4 1523 aa20.32■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Usp32F8VPZ3 1604 aa20.31■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 ChgaP26339 463 aaKnown RBP20.31■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Rlbp1Q9Z275 317 aa20.31■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Q4VA45 678 aa20.3■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Idi2Q8BFZ6 227 aa20.3■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Uhrf1bp1B2KF50 1429 aa20.29■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 MlecQ6ZQI3 291 aaKnown RBP20.29■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Ppp1r3fQ9JIG4 799 aa20.29■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Cps1Q8C196 1500 aa20.28■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Znf541Q0GGX2 1363 aa20.28■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 PzpQ61838 1495 aa20.28■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Pik3c2bE9QAN8 1632 aa20.28■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 CastP51125 788 aa20.28■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Ciz1Q8VEH2 845 aa20.27■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Ttc21aQ8C0S4 1314 aa20.27■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 PtpruB1AUH1 1446 aa20.27■□□□□ 0.84
Ccdc43-201ENSMUST00000092569 Kif1aP33173 1695 aa20.26■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Uhrf1bp1lA2RSJ4 1457 aa20.26■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Ankrd50F7BE84 1390 aa20.26■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Fchsd2Q3USJ8 740 aa20.26■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Chd4Q6PDQ2 1915 aaKnown RBP20.25■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 PaskQ8CEE6 1383 aa20.25■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Pik3r4Q8VD65 1358 aa20.25■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Ppp1r15aP17564 657 aa20.25■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Tnrc6bQ8BKI2 1810 aaKnown RBP20.25■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Rbm25B2RY56 838 aaKnown RBP20.24■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Armcx1Q9CX83 456 aa20.24■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Swt1Q9DBQ9 907 aa20.24■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 NudcO35685 332 aaKnown RBP20.22■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Rangap1P46061 589 aaKnown RBP20.22■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 CatipB9EKE5 520 aa20.21■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Ccdc60Q8C4J0 545 aa20.21■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 NgefQ8CHT1 710 aa20.21■□□□□ 0.83
Ccdc43-201ENSMUST00000092569 Atp7bQ64446 1462 aa20.2■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Q3UJC8 639 aa20.2■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Nkx1-2P42580 305 aa20.2■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Mcm10Q0VBD2 885 aa20.19■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Rsph6aQ8CDR2 708 aa20.19■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 AampJ3QN89 436 aa20.18■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 4930567H17RikQ3V0K5 233 aa20.18■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Spef2Q8C9J3 1734 aa20.18■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 GphnQ8BUV3 769 aaKnown RBP20.17■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Trim30dE9PWL0 497 aa20.16■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Znf330Q922H9 316 aa20.16■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Sox12Q04890 314 aa20.16■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 CanxP35564 591 aaKnown RBP20.15■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 G3bp1P97855 465 aaKnown RBP20.15■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Cdc37l1Q9CZP7 335 aa20.15■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 Senp3Q9EP97 568 aaKnown RBP20.15■□□□□ 0.82
Ccdc43-201ENSMUST00000092569 N4bp2F8VQG7 1678 aaKnown RBP20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Ccdc171E9Q1U1 1324 aa20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Rreb1Q3UH06 1700 aaKnown RBP20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Gm6268A2A3U9 297 aa20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Maco1Q7TQE6 664 aaKnown RBP20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Ak7Q9D2H2 614 aa20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Cabp2Q9JLK4 216 aa20.14■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Bcl9Q9D219 1425 aa20.13■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Plin1Q8CGN5 517 aa20.13■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Topaz1E5FYH1 1653 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Arap3Q8R5G7 1538 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Ccdc27Q3V036 639 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Cluap1Q8R3P7 413 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Hoxb7P09024 217 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Nectin2P32507 530 aa20.12■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Sirt1Q923E4 737 aa20.11■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Ccdc183A2AJB1 534 aa20.1■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Nutm1Q8BHP2 1126 aa20.1■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Ipo8Q7TMY7 1010 aa20.1■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Tmem94Q7TSH8 1360 aa20.1■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Eif4a2P10630 407 aa20.09■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Idi1P58044 227 aa20.09■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Iqcf3Q9D498 203 aa20.09■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Alpk3Q924C5 1678 aa20.09■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Gm10563F6WIE4 79 aa20.08■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Pnmal2G3X9N3 661 aa20.08■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Vamp4O70480 141 aa20.08■□□□□ 0.81
Ccdc43-201ENSMUST00000092569 Plekhm2Q80TQ5 1018 aa20.08■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms