RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Rad21Q61550 635 aaKnown RBP9.94□□□□□ -0.82
Trim40-201ENSMUST00000087158 Golga2Q921M4 999 aa9.94□□□□□ -0.82
Trim40-201ENSMUST00000087158 Kif16bB1AVY7 1312 aa9.94□□□□□ -0.82
Trim40-201ENSMUST00000087158 Liat1Q810M6 228 aa9.94□□□□□ -0.82
Trim40-201ENSMUST00000087158 Usp19Q3UJD6 1360 aa9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 NinlQ6ZQ12 1394 aa9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 Map3k19E9Q3S4 1311 aa9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 GphnQ8BUV3 769 aaKnown RBP9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 CrbnQ8C7D2 445 aa9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 GsdmaQ9EST1 446 aa9.93□□□□□ -0.82
Trim40-201ENSMUST00000087158 Fgd1P52734 960 aa9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 Map4k4P97820 1233 aaKnown RBP9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 HnrnpmQ9D0E1 729 aaKnown RBP9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 Usp32F8VPZ3 1604 aa9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 Tnrc6bQ8BKI2 1810 aaKnown RBP9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 PtpruB1AUH1 1446 aa9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 Idi2Q8BFZ6 227 aa9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 P2rx7Q9Z1M0 595 aa9.92□□□□□ -0.82
Trim40-201ENSMUST00000087158 Pik3c2bE9QAN8 1632 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Erbb3Q61526 1339 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Ttc41Q692V3 1318 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Ms4a5Q810P8 197 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Sirt1Q923E4 737 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Uspl1Q3ULM6 1089 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Pip4k2bQ80XI4 416 aa9.91□□□□□ -0.82
Trim40-201ENSMUST00000087158 Scn4aQ9ER60 1841 aa9.9□□□□□ -0.83
Trim40-201ENSMUST00000087158 ArsiQ32KI9 573 aa9.89□□□□□ -0.83
Trim40-201ENSMUST00000087158 Rreb1Q3UH06 1700 aaKnown RBP9.89□□□□□ -0.83
Trim40-201ENSMUST00000087158 Speer4f1Q9D5Q6 258 aa9.89□□□□□ -0.83
Trim40-201ENSMUST00000087158 Egfem1Q8C088 590 aa9.89□□□□□ -0.83
Trim40-201ENSMUST00000087158 Slc34a2Q9DBP0 697 aa9.89□□□□□ -0.83
Trim40-201ENSMUST00000087158 Q3UJC8 639 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Ralbp1Q62172 648 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Tsen2Q6P7W5 460 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Pknox2Q8BG99 474 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Pak3Q61036 559 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Fbxo41Q6NS60 873 aa9.88□□□□□ -0.83
Trim40-201ENSMUST00000087158 Sox12Q04890 314 aa9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Ncbp3Q8BZR9 615 aaKnown RBP9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 U2af1Q9D883 239 aaKnown RBP9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Plekhh1Q80TI1 1356 aa9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Kif1aP33173 1695 aa9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Kif20bQ80WE4 1774 aaKnown RBP9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Topaz1E5FYH1 1653 aa9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 N4bp2F8VQG7 1678 aaKnown RBP9.87□□□□□ -0.83
Trim40-201ENSMUST00000087158 Iqsec2Q5DU25 1478 aa9.86□□□□□ -0.83
Trim40-201ENSMUST00000087158 Znf316Q6PGE4 1016 aa9.86□□□□□ -0.83
Trim40-201ENSMUST00000087158 Ccdc30Q8BVF4 654 aa9.86□□□□□ -0.83
Trim40-201ENSMUST00000087158 D430041D05RikF6ZGR6 1678 aa9.86□□□□□ -0.83
Trim40-201ENSMUST00000087158 Znf335A2A5K6 1337 aa9.86□□□□□ -0.83
Trim40-201ENSMUST00000087158 Trim28Q62318 834 aa9.85□□□□□ -0.83
Trim40-201ENSMUST00000087158 Chd4Q6PDQ2 1915 aaKnown RBP9.84□□□□□ -0.83
Trim40-201ENSMUST00000087158 Rims2Q9EQZ7 1530 aa9.84□□□□□ -0.83
Trim40-201ENSMUST00000087158 Neurod2Q62414 383 aa9.84□□□□□ -0.83
Trim40-201ENSMUST00000087158 Hoxb7P09024 217 aa9.83□□□□□ -0.84
Trim40-201ENSMUST00000087158 Als2Q920R0 1651 aa9.83□□□□□ -0.84
Trim40-201ENSMUST00000087158 Ciz1Q8VEH2 845 aa9.83□□□□□ -0.84
Trim40-201ENSMUST00000087158 Rwdd1Q9CQK7 243 aa9.83□□□□□ -0.84
Trim40-201ENSMUST00000087158 Znf541Q0GGX2 1363 aa9.83□□□□□ -0.84
Trim40-201ENSMUST00000087158 C5P06684 1680 aa9.82□□□□□ -0.84
Trim40-201ENSMUST00000087158 Apaf1O88879 1249 aa9.82□□□□□ -0.84
Trim40-201ENSMUST00000087158 Ppp1r15aP17564 657 aa9.82□□□□□ -0.84
Trim40-201ENSMUST00000087158 Astn2Q80Z10 1352 aa9.82□□□□□ -0.84
Trim40-201ENSMUST00000087158 Slc12a5Q91V14 1138 aa9.82□□□□□ -0.84
Trim40-201ENSMUST00000087158 Mon2Q80TL7 1715 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Abcc10Q8R4P9 1501 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Rimbp3Q3V0F0 1606 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Birc3O08863 600 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 NeflP08551 543 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Akt1s1Q9D1F4 257 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Mdc1Q5PSV9 1707 aa9.81□□□□□ -0.84
Trim40-201ENSMUST00000087158 Fchsd2Q3USJ8 740 aa9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Tcerg1Q8CGF7 1100 aaKnown RBP9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Mbd3Q9Z2D8 285 aaKnown RBP9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Mapk8ip3Q9ESN9 1337 aa9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Gm10563F6WIE4 79 aa9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Ccdc27Q3V036 639 aa9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Ipo9Q91YE6 1041 aa9.8□□□□□ -0.84
Trim40-201ENSMUST00000087158 Cavin4A2AMM0 362 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 Med1Q925J9 1575 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 CemipQ8BI06 1361 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 Idi1P58044 227 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 Dusp27Q148W8 1138 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 Atxn3Q9CVD2 355 aa9.79□□□□□ -0.84
Trim40-201ENSMUST00000087158 Uhrf1bp1B2KF50 1429 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 Fam135bQ9DAI6 1403 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 Tmem94Q7TSH8 1360 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 PaskQ8CEE6 1383 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 Prkrip1Q9CWV6 186 aaKnown RBP9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 PalmQ9Z0P4 383 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 Thsd7aQ69ZU6 1645 aa9.78□□□□□ -0.84
Trim40-201ENSMUST00000087158 TnikP83510 1323 aa9.77□□□□□ -0.84
Trim40-201ENSMUST00000087158 NalcnQ8BXR5 1738 aa9.77□□□□□ -0.84
Trim40-201ENSMUST00000087158 NgefQ8CHT1 710 aa9.77□□□□□ -0.84
Trim40-201ENSMUST00000087158 Ap3b2Q9JME5 1082 aa9.77□□□□□ -0.84
Trim40-201ENSMUST00000087158 Uhrf1bp1lA2RSJ4 1457 aa9.77□□□□□ -0.85
Trim40-201ENSMUST00000087158 Cdk12Q14AX6 1484 aaKnown RBP9.77□□□□□ -0.85
Trim40-201ENSMUST00000087158 Col14a1Q80X19 1797 aa9.77□□□□□ -0.85
Trim40-201ENSMUST00000087158 Spef2Q8C9J3 1734 aa9.77□□□□□ -0.85
Trim40-201ENSMUST00000087158 Tns3Q5SSZ5 1440 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms