RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Ciz1Q8VEH2 845 aa14.83□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Hoxb7P09024 217 aa14.83□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Trim28Q62318 834 aa14.83□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Tsen2Q6P7W5 460 aa14.83□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Mbd3Q9Z2D8 285 aaKnown RBP14.83□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Q3UJC8 639 aa14.82□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Spef2Q8C9J3 1734 aa14.81□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Fam135bQ9DAI6 1403 aa14.81□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Wdr43Q6ZQL4 677 aaKnown RBP14.81□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Bcl11aQ9QYE3 773 aa14.81□□□□□ -0.04
Vamp1-202ENSMUST00000063588 NalcnQ8BXR5 1738 aa14.81□□□□□ -0.04
Vamp1-202ENSMUST00000063588 U2af1Q9D883 239 aaKnown RBP14.8□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Rimbp3Q3V0F0 1606 aa14.8□□□□□ -0.04
Vamp1-202ENSMUST00000063588 TnikP83510 1323 aa14.79□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Gm38655A0A286YDK6 273 aa14.79□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Fchsd2Q3USJ8 740 aa14.79□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Rwdd1Q9CQK7 243 aa14.79□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Abcc10Q8R4P9 1501 aa14.79□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Astn2Q80Z10 1352 aa14.78□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Unc13bQ9Z1N9 1602 aa14.78□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Med1Q925J9 1575 aa14.78□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Ppp1r15aP17564 657 aa14.77□□□□□ -0.04
Vamp1-202ENSMUST00000063588 Thsd7aQ69ZU6 1645 aa14.76□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Prkrip1Q9CWV6 186 aaKnown RBP14.76□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Uhrf1bp1B2KF50 1429 aa14.76□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Map2P20357 1828 aa14.76□□□□□ -0.05
Vamp1-202ENSMUST00000063588 NeflP08551 543 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Neurod2Q62414 383 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Ubr1O70481 1757 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Col14a1Q80X19 1797 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 MyclP10166 368 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Scn7aB1AYL1 1681 aa14.75□□□□□ -0.05
Vamp1-202ENSMUST00000063588 CemipQ8BI06 1361 aa14.74□□□□□ -0.05
Vamp1-202ENSMUST00000063588 PaskQ8CEE6 1383 aa14.74□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Pik3c2aQ61194 1686 aa14.74□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Phlpp1Q8CHE4 1687 aa14.74□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Scaf1Q5U4C3 1256 aaKnown RBP14.74□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Mapk8ip3Q9ESN9 1337 aa14.73□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Ppp4r2Q0VGB7 417 aa14.73□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Znf316Q6PGE4 1016 aa14.73□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Slc12a5Q91V14 1138 aa14.73□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Col16a1Q8BLX7 1580 aa14.73□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Cavin4A2AMM0 362 aa14.72□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Cdk12Q14AX6 1484 aaKnown RBP14.71□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Apaf1O88879 1249 aa14.71□□□□□ -0.05
Vamp1-202ENSMUST00000063588 Atp7bQ64446 1462 aa14.69□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Dusp27Q148W8 1138 aa14.69□□□□□ -0.06
Vamp1-202ENSMUST00000063588 C3P01027 1663 aa14.69□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Zfp777B9EKF4 885 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 AampJ3QN89 436 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Birc3O08863 600 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Nrxn3Q6P9K9 1571 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Uhrf1bp1lA2RSJ4 1457 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Zmym3Q9JLM4 1370 aa14.68□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Nolc1E9Q5C9 702 aaKnown RBP14.67□□□□□ -0.06
Vamp1-202ENSMUST00000063588 PalmQ9Z0P4 383 aa14.67□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Gm10563F6WIE4 79 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Q4VA45 678 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Rad17Q6NXW6 688 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Rsph6aQ8CDR2 708 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Ccar1Q8CH18 1146 aaKnown RBP14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Tns3Q5SSZ5 1440 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Tcerg1Q8CGF7 1100 aaKnown RBP14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Atxn3Q9CVD2 355 aa14.66□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Idi1P58044 227 aa14.65□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Swt1Q9DBQ9 907 aa14.65□□□□□ -0.06
Vamp1-202ENSMUST00000063588 Sipa1l2Q80TE4 1722 aa14.64□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Kcnh8P59111 1102 aa14.64□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ap3b2Q9JME5 1082 aa14.64□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ttc21aQ8C0S4 1314 aa14.64□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ptpn23Q6PB44 1692 aa14.64□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Parp14Q2EMV9 1817 aa14.63□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Gas2l2Q5SSG4 860 aa14.63□□□□□ -0.07
Vamp1-202ENSMUST00000063588 MlecQ6ZQI3 291 aaKnown RBP14.63□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Wnk3Q80XP9 1757 aa14.63□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Tmem94Q7TSH8 1360 aa14.63□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ksr2Q3UVC0 959 aa14.62□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Trim58Q5NCC9 485 aa14.62□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Camta1A2A891 1682 aa14.62□□□□□ -0.07
Vamp1-202ENSMUST00000063588 PtprvP70289 1705 aa14.62□□□□□ -0.07
Vamp1-202ENSMUST00000063588 NudcO35685 332 aaKnown RBP14.61□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Iqcf3Q9D498 203 aa14.61□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ankrd50F7BE84 1390 aa14.61□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Slit2Q9R1B9 1521 aa14.61□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Frmpd2A0A140LI67 1392 aa14.6□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Tmem2Q5FWI3 1383 aa14.59□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ccdc171E9Q1U1 1324 aa14.59□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Znf521Q6KAS7 1311 aa14.59□□□□□ -0.07
Vamp1-202ENSMUST00000063588 NgefQ8CHT1 710 aa14.59□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Supt16hQ920B9 1047 aa14.59□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Kdm2bQ6P1G2 1309 aa14.58□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Eif4a2P10630 407 aa14.58□□□□□ -0.07
Vamp1-202ENSMUST00000063588 CastP51125 788 aa14.58□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Dennd6aQ8BH65 605 aa14.58□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Ccdc9Q8VC31 543 aaKnown RBP14.58□□□□□ -0.07
Vamp1-202ENSMUST00000063588 Col18a1P39061 1774 aa14.57□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Sox12Q04890 314 aa14.57□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Ano8Q6PB70 1060 aa14.57□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Nlgn1Q99K10 843 aa14.57□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Apbb1Q9QXJ1 710 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms