RNA–Protein interactions for RNA: ENSMUST00000057767.4

Upk1b-201, Transcript of Uroplakin-1b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1b, Length 1,769 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1b-201ENSMUST00000057767 Hsp90ab1P11499 724 aaKnown RBP13.35□□□□□ -0.27
Upk1b-201ENSMUST00000057767 IqubQ8CDK3 788 aa13.35□□□□□ -0.27
Upk1b-201ENSMUST00000057767 PrkcshO08795 521 aa13.35□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Cnga1P29974 684 aa13.35□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Ak7Q9D2H2 614 aa13.35□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Adamts7Q68SA9 1657 aa13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Ccdc183A2AJB1 534 aa13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Cald1E9QA15 768 aaKnown RBP13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Pank1Q8K4K6 548 aa13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Slc52a2Q9D8F3 450 aa13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Nrxn1Q9CS84 1514 aa13.34□□□□□ -0.27
Upk1b-201ENSMUST00000057767 Ercc6l2Q9JIM3 1537 aa13.33□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Gas2l2Q5SSG4 860 aa13.32□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Topaz1E5FYH1 1653 aa13.31□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Gtf3c3Q3TMP1 882 aa13.31□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Duxf3A0A0N4SV92 674 aa13.3□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Ppp1r9bQ6R891 817 aaKnown RBP13.3□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Eif2s2Q99L45 331 aaKnown RBP13.3□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Rsph4aQ8BYM7 716 aa13.3□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Ccar1Q8CH18 1146 aaKnown RBP13.3□□□□□ -0.28
Upk1b-201ENSMUST00000057767 AU022751B1B0V2 589 aa13.29□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Ppp2r3aB2RXC8 1150 aa13.29□□□□□ -0.28
Upk1b-201ENSMUST00000057767 P2rx7Q9Z1M0 595 aa13.29□□□□□ -0.28
Upk1b-201ENSMUST00000057767 4930567H17RikQ3V0K5 233 aa13.28□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Atxn3Q9CVD2 355 aa13.28□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Bcl9Q9D219 1425 aa13.28□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Htatsf1Q8BGC0 757 aa13.27□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Ciz1Q8VEH2 845 aa13.27□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Atl3Q91YH5 541 aa13.27□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Rlbp1Q9Z275 317 aa13.27□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Usp32F8VPZ3 1604 aa13.27□□□□□ -0.28
Upk1b-201ENSMUST00000057767 Tsen2Q6P7W5 460 aa13.27□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Polr3glQ8R0C0 218 aa13.27□□□□□ -0.29
Upk1b-201ENSMUST00000057767 U2af1Q9D883 239 aaKnown RBP13.27□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Ksr2Q3UVC0 959 aa13.26□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Pdlim2Q8R1G6 349 aa13.26□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Znf541Q0GGX2 1363 aa13.25□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Arhgef28P97433 1693 aa13.25□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Scn4aQ9ER60 1841 aa13.25□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Hs1bp3Q3TC93 395 aa13.25□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Exosc9Q9JHI7 438 aaKnown RBP13.25□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Dip2aQ8BWT5 1523 aa13.24□□□□□ -0.29
Upk1b-201ENSMUST00000057767 PaskQ8CEE6 1383 aa13.23□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Uhrf1bp1B2KF50 1429 aa13.23□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Apaf1O88879 1249 aa13.22□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Sptbn5F6UCX4 1208 aa13.22□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Rabep1O35551 862 aa13.22□□□□□ -0.29
Upk1b-201ENSMUST00000057767 Tbc1d32Q3URV1 1296 aa13.21□□□□□ -0.29
Upk1b-201ENSMUST00000057767 PplQ9R269 1755 aa13.21□□□□□ -0.29
Upk1b-201ENSMUST00000057767 KarsQ99MN1 595 aaKnown RBP13.2□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Phlpp2Q8BXA7 1320 aa13.2□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Dusp27Q148W8 1138 aa13.2□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Armcx1Q9CX83 456 aa13.2□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Ccdc171E9Q1U1 1324 aa13.19□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Abca14E9Q8F8 1683 aa13.19□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Map7O88735 730 aa13.19□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Prrc2bQ7TPM1 1486 aaKnown RBP13.19□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Trim26Q99PN3 545 aa13.19□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Ttc21aQ8C0S4 1314 aa13.18□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Cavin4A2AMM0 362 aa13.18□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Ankrd50F7BE84 1390 aa13.17□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Atp7bQ64446 1462 aa13.17□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Chd2E9PZM4 1827 aaKnown RBP13.17□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Gm6268A2A3U9 297 aa13.17□□□□□ -0.3
Upk1b-201ENSMUST00000057767 CastP51125 788 aa13.17□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Cep170bQ80U49 1574 aa13.16□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Kif13aQ9EQW7 1749 aa13.16□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Itsn1Q9Z0R4 1714 aa13.16□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Plekhg1F6S200 1446 aa13.16□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Gsto1O09131 240 aa13.15□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Stk26Q99JT2 416 aa13.15□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Ltbp4Q8K4G1 1666 aa13.15□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Rimbp3Q3V0F0 1606 aa13.15□□□□□ -0.3
Upk1b-201ENSMUST00000057767 Tnpo1Q8BFY9 898 aaKnown RBP13.15□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Kif1aP33173 1695 aa13.14□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Fchsd2Q3USJ8 740 aa13.14□□□□□ -0.31
Upk1b-201ENSMUST00000057767 GphnQ8BUV3 769 aaKnown RBP13.14□□□□□ -0.31
Upk1b-201ENSMUST00000057767 FanciQ8K368 1330 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Shq1Q7TMX5 569 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Atp1b4Q99ME6 356 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 4933402E13RikQ9D4D2 429 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Zc3h13E9Q784 1729 aaKnown RBP13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 NinlQ6ZQ12 1394 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Phlpp1Q8CHE4 1687 aa13.13□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Rbm25B2RY56 838 aaKnown RBP13.12□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Ccdc60Q8C4J0 545 aa13.12□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Cluap1Q8R3P7 413 aa13.12□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Pik3r4Q8VD65 1358 aa13.12□□□□□ -0.31
Upk1b-201ENSMUST00000057767 G3bp1P97855 465 aaKnown RBP13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Pip4k2bQ80XI4 416 aa13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Chmp4bQ9D8B3 224 aaKnown RBP13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Swt1Q9DBQ9 907 aa13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Spef2Q8C9J3 1734 aa13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 NktrP30415 1453 aa13.11□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Naip7Q9JIB3 1402 aa13.1□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Rims2Q9EQZ7 1530 aa13.1□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Mfap1aC0HKD8 439 aaKnown RBP13.1□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Mfap1bC0HKD9 439 aaKnown RBP13.1□□□□□ -0.31
Upk1b-201ENSMUST00000057767 SkilQ60665 675 aa13.1□□□□□ -0.31
Upk1b-201ENSMUST00000057767 Maco1Q7TQE6 664 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms